Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3286 174 2e-38 seq753 125 1e-23 >seq3286 Length=1922 Score = 174 bits (192), Expect = 2e-38 Identities = 575/873 (66%), Gaps = 26/873 (3%) Strand=Plus/Plus Query 124995 CTGTTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTT 125054 ||||| || ||| ||| || ||||| ||| | | |||||| || || || | | Sbjct 668 CTGTTCCCGATCCAGTACCACGACATCTGGAAGAAGTACAAGGAGCAGGAGAGCTGCATC 727 Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114 |||||| | || ||| |||||||| || |||||| || ||| ||| |||| Sbjct 728 TGGACGCTGGAGGAGATCGATCTGGGAAATGACCTGACGGACTGGAAGAAGA---TGACG 784 Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174 || |||| | || || | || | | |||||||| || ||| ||| || ||| Sbjct 785 GAGGGCGAGCAGCACTTCATCAAGTACGTGCTTGCCTTCTTCGCTGGCAGCGACGGCATC 844 Query 125175 GTCAACGACAATCTGTTGACACGATTC-TCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 || | || || || | || ||| | || || | | | || |||| |||| Sbjct 845 GTGATTGAGAACCTCGCGCAGCGCTTCATGTCG-GACGTCAAGGTGCCGGAGGCC-CGTG 902 Query 125234 CTTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGA 125292 | || ||||| ||||| | ||||| |||||| | ||||| || | |||||| ||| Sbjct 903 CGTTCTACGGCTTCCAGCTGATGATGGAGAACATCCACTCCGAGACCTACTCTGTGCTGC 962 Query 125293 TTGACATGTACATTCGCGATCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACACG 125351 | |||| |||||| | || | || | | || | | ||| | |||| ||| | ||| Sbjct 963 TGGACACGTACAT-CACGGACAGCGAGGAGAAGCTGAAGCTGCTGCACGCGATCCAGACG 1021 Query 125352 GTGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCT 125411 | |||| || | || ||||| | |||| | | || ||||||| || | | || | Sbjct 1022 ATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGCTGGATCG--GAAG-CGAGGCG 1078 Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAG 125470 | | || | ||| | | || || || || |||||||||||||| || || | Sbjct 1079 AGCTTCCAGGAGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCC 1138 Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530 || |||| | ||||| ||||| ||||||||||| | |||||||| ||||| ||| || Sbjct 1139 TTCTGCG-CGATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCCGGCCTGACCTTCAGCAA 1197 Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAA 125590 |||| | || || || |||||||| || ||| |||||||| || |||| ||| Sbjct 1198 CGAGCTGATTTCCCGTGACGAGGGTCTGCACACGGACTTTGCGTGCCTGCTGTA---CAA 1254 Query 125591 CTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGC 125650 | | | | || || || | ||| || || | ||||| | |||||||| Sbjct 1255 C-AGCCACATCAAGAACA-AGCTGTCGCGC-GAGCGCGTGCTGAACATCATCACCGATGC 1311 Query 125651 CGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAA 125710 |||| || || | ||||| | ||| ||||| || || || ||||||| ||||| Sbjct 1312 CGTGGACATCGAGAAGGAGTTCATCTGCGAGTCCCTCCCCGTGCGCCTGATTGGTATGAA 1371 Query 125711 CTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGAT 125770 || || | ||| || ||||||| ||||| ||||| || ||||| ||| | | | Sbjct 1372 CTCGGAGATGATGAGCCAGTACATTGAGTTCGTGGCGGACCGTCTGCTG---GTCTCCCT 1428 Query 125771 TGGC--CGC-AAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACT 125827 |||| || ||| |||||||| | ||| ||||| || |||||| | || || || Sbjct 1429 TGGCGAGGCGAAGCACTACAACGCGACGAACCCCTTCGACTTCATGGAGATGATCTCCCT 1488 Query 125828 AGAGGGTAAGACCAACTTTTTCGAGAAGAAGGT 125860 || ||||||||||| |||||||||||||| Sbjct 1489 CCCTGGCAAGACCAACTTCTTCGAGAAGAAGGT 1521 >seq753 Length=7390 Score = 125 bits (138), Expect = 1e-23 Identities = 303/449 (67%), Gaps = 16/449 (4%) Strand=Plus/Minus Query 96906 GCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGACTT---TATCGAGATGCGCAAA 96962 ||||||||| | || || |||||||| ||| ||||||| || | || || ||| || Sbjct 3845 GCCGTCTACCTCGAGCCCTGGCACGCCGACATTTTTGAGTTCCTTCTCCTGAAGCGTAAC 3786 Query 96963 AACTCTGGCTTTGAAGAGG-CA--CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCA 97019 | | || | | |||| || || ||| | || | || || || |||||| | || Sbjct 3785 ACC---GG---TAAGGAGGACAACCGTGCCCGTGATCTCTTCTACGCCCTCTGGATCCCC 3732 Query 97020 GATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCTAATGTGCCCCGAC-TC 97078 ||| | ||||||||||| ||||| || ||| | |||| || ||| |||| | || Sbjct 3731 GATCTCTTCATGAAGCGTGTCAAGAGCGAGGGCAAGTGGACGCTGATGGACCCCCATATC 3672 Query 97079 GTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGA 97138 |||| || ||| ||| ||| ||||| ||||||||| |||||| || ||||| Sbjct 3671 TGCACC-GGCCTGAGCGACTGCCACGGCGAGGAGTTTGAGAAGAAGTACGAGGAGTACGA 3613 Query 97139 GCAAGAGGGCCGATACGTGAG-ACGAGTCGATGCACGAGAACTGTGGAAGGCCATCGTGA 97197 | | |||| | | | | || | ||| || | ||| |||||| ||||| || Sbjct 3612 GAGACAGGGTCTGGGCATCCGCACCA-TCGCCGCGCAAGAGCTGTGGTTCGCCATTCTGG 3554 Query 97198 CGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGATACCGTGAATCGCAACA 97257 | | ||||| ||||| || || | ||| || |||||||| | || || || Sbjct 3553 AGTCCCAGGTGGAGACCGGTGTCCCTTTCATGCTGTACAAGGACTCTTGCAACCGAAAGT 3494 Query 97258 GCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGT 97317 |||||| | |||||||||||||| ||||||| |||||||| || ||| | |||| Sbjct 3493 CCAACCAGAAAAATCTGGGCACCATCAAGTGCTCCAACCTGTGCACCGAGATTATGGAGT 3434 Query 97318 ACGCCTCTCCGGACGAGACGGCAGTTTGC 97346 || || |||||||||||| || ||| Sbjct 3433 ACACCAGCAAGGACGAGACGGCGGTGTGC 3405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740985529452280