Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq5385 104 5e-17 seq153 98.7 2e-15 seq4492 95.1 3e-14 >seq5385 Length=1056 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || ||||| | || || | ||| ||| Sbjct 883 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCT 824 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || || || || | ||| || || || || || || || || ||| Sbjct 823 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 764 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || || || || | ||| ||||| | || ||||| || | || ||| Sbjct 763 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 704 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || || || || || ||||| Sbjct 703 TTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 86.0 bits (94), Expect = 1e-11 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || ||||| | || || | || ||| Sbjct 198 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCT 139 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || || || || | ||| || || || || || || || || ||| Sbjct 138 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 79 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || || || || | ||| ||||| | || ||||| || | || ||| Sbjct 78 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 19 Query 104528 TTACCAGTAAGTGTTTT 104544 || || || || || || Sbjct 18 TTGCCGGTGAGGGTCTT 2 >seq153 Length=16899 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || ||||| | || || | || || Sbjct 9629 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCC 9570 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || ||||| || || | ||| || || || || || || || || ||| Sbjct 9569 TCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 9510 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || || || || | ||| ||||| | || ||||| || | || ||| Sbjct 9509 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 9450 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || ||||| || || || || || ||||| Sbjct 9449 TTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq4492 Length=1347 Score = 95.1 bits (104), Expect = 3e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || || || ||||| || || ||||| | || || | || ||| Sbjct 146 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCT 205 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || || || || || || || || || | ||| || || || || || || || || ||| Sbjct 206 TCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 265 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 |||||||| || || || || || | ||| ||||| | || ||||| || | || ||| Sbjct 266 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 325 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCATTTT 104562 || || || || || || || || || ||||| || Sbjct 326 TTGCCGGTGAGGGTCTTCACGAAAATTTGCATATT 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151281075021724