Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3286 179 3e-40 seq753 149 6e-31 seq5385 131 2e-25 seq4492 127 2e-24 seq153 123 2e-23 seq7439 104 2e-17 >seq3286 Length=1922 Score = 179 bits (198), Expect = 3e-40 Identities = 341/499 (68%), Gaps = 5/499 (1%) Strand=Plus/Plus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143 || |||||| | | ||||| | || |||||| || |||||| | ||| ||| Sbjct 1022 ATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGCTGGATCG---GAAGCGAGGCG 1078 Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203 | ||| ||||| || | | |||||| ||||||||| |||| || || ||| Sbjct 1079 AGCTTCCAGGAGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCC 1138 Query 46204 TTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 || ||| ||||| | | || | ||| | |||||||||||||| || |||||| Sbjct 1139 TTCTGCGCGATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCCGGCCTGACCTTCAGCAAC 1198 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 |||||||| || || |||||||| ||||| |||||||||||||| || || |||| Sbjct 1199 GAGCTGATTTCCCGTGACGAGGGTCTGCACACGGACTTTGCGTGCCTGCTGTACAACAGC 1258 Query 46324 CGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGCC 46383 | | | | ||||||| ||| ||| |||||||| ||| ||| || || |||| | Sbjct 1259 CACATCAAGAACAAGCTGTCGCGCGAGCGCGTGCTGAACATCATCACCGATGCCGTGGAC 1318 Query 46384 ATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGC-CCTGCTGGGCATGAACGCACA 46442 || ||||||||||| | | | || |||| ||| |||| | || |||||| | | Sbjct 1319 ATCGAGAAGGAGTTCATCTGCGAGTCCCTCCCCG-TGCGCCTGATTGGTATGAACTCGGA 1377 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCC 46502 | ||| || | ||||| ||||| || |||||||| ||||| || ||| | || | Sbjct 1378 GATGATGAGCCAGTACATTGAGTTCGTGGCGGACCGTCTGCTGGTCTCCCTTGGCGAGGC 1437 Query 46503 GAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAA 46562 |||||| | ||||| || || || || || ||| | | |||||||| ||||| Sbjct 1438 GAAGCACTACAACGCGACGAACCCCTTCGACTTCATGGAGATGATCTCCCTCCCTGGCAA 1497 Query 46563 AACTAATTTTTTCGAAAAG 46581 || || || ||||| ||| Sbjct 1498 GACCAACTTCTTCGAGAAG 1516 >seq753 Length=7390 Score = 149 bits (164), Expect = 6e-31 Identities = 713/1120 (64%), Gaps = 44/1120 (4%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 || || ||| | ||||| || || | ||| || | || | ||| | |||||||| Sbjct 2818 TTCACAACCGGGAACTCCCCACTCAGCGTACGGCGGACGTAAATGTTGGTGGTGAAGGGC 2877 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||| || || || || |||||| ||| | ||||||||||| ||||||| Sbjct 2878 TCGAAGCACTCATTGTTACCGAGAATTTGACTGGTGGAGGCGGTGGGCATCGGCGCCACC 2937 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 || | || || |||| ||| | |||||| | ||||| || | |||| | ||| Sbjct 2938 AACAGAGAGTTTCGCATACCGGTCGTCTTGACGCGCTCCTTCAGGGCGTCCCAGTTCCAG 2997 Query 145238 AGCGAAGTC---GGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294 | || ||| || ||||| | ||| |||||| || ||| | | ||||||| Sbjct 2998 CGGCCGCTCACCGGCTTCTTCTCCCAGAGATCGAACTGCAGAAGGCCTTGGGAGGCGGGG 3057 Query 145295 CTGCCTTGAAAGGA-----ACTGTAACT-----GCC-CCAAGTTTTGGCGAGCTCGCAAC 145343 ||||| |||||| || || || ||| |||||| | ||| Sbjct 3058 CTGCCGGGAAAGGTTTCATACGGTCCCTCCACCGCCGCCAAGTCCACG-GAG-------- 3108 Query 145344 TCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTT 145403 | ||||| ||| || | || || |||||| || | | ||| | | || ||| | Sbjct 3109 --GACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTCAACCGCTGCGCCT 3166 Query 145404 CATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCA 145463 | |||||| | | || | ||| || || | ||| || || || | |||||| | || | Sbjct 3167 CCTCGCTCGTGAAGGGGAGGCGAAGGAGAATAAAGGCGTCCGCCAACCCCTGCACGCCGA 3226 Query 145464 CGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTAC 145523 ||||| || || | | |||||| || || |||| || | || || || | Sbjct 3227 GGCCGACCGGGCGGTTTCGCATGTTACTGCGTCTGGCCGTTTCCACGGGGTAGTAGTTGC 3286 Query 145524 GGTCGATAATTTTATTCAAGTT-TCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCA 145582 |||| || | | || | || | | | || |||| || | | | ||| | Sbjct 3287 GGTCAATGACTCGGTTGAGATTGTAGGTC-ACGTCCTTGGTGACCTCGTAGAGCTTCTGG 3345 Query 145583 AAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTA 145642 |||||| ||| || | |||| ||| || |||||| || ||||| || Sbjct 3346 TGGTCAAAGACGCCCTTCTCGGTGTCCACGAAGCGGGGGAGGGCGATGGAGGCCAAGTTG 3405 Query 145643 CAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACAT 145702 || || |||||||| || | | |||| | | ||||||| ||||| ||| || Sbjct 3406 CACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAATCTCGGTGCACAGGTTGGAGCAC 3465 Query 145703 TTGATGGTTCCCAGATTTTGCTGATT--ACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 |||||||| |||||||||| ||| || ||||| | |||||| | ||||||||| |||| Sbjct 3466 TTGATGGTGCCCAGATTTTTCTGGTTGGACTTT--CGGTTGCAAGAGTCCTTGTACAGCA 3523 Query 145761 TGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT--AAAACGGTGCAAGTCCTGCGC 145818 || | || | || ||||||||||| | ||||| || ||| || || |||| Sbjct 3524 TGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATGGCGAAC--CACAGCTCTTGCG- 3580 Query 145819 ACGCACCTGCTGCTGGTAGC--GGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAAC 145876 || || ||| | | | | |||| | ||||| | | ||| || ||||||| Sbjct 3581 -CGGCGATGGTGCGGATGCCCAGACCCTGTCTCTCGTACTCCTCGTACTTCTTCTCAAAC 3639 Query 145877 GCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACG 145936 | |||| ||| ||| |||||||| || | | ||| |||||||| ||| | Sbjct 3640 TCCTCGCCGTGGCAGTCGCTCAGGCCGGTGCAGATATGGGGGTCCATCAGCGTCCACTTG 3699 Query 145937 CCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCG 145996 || | | ||||| |||| ||| || | ||| || | ||| || ||||| | | || Sbjct 3700 CCCTCGCTCTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGTAGAAGAGATCA 3759 Query 145997 CGCGCTTTGCAATCCTCAGCACCCATGTTTCGCTTCAAATTAAGCACACT-ATAGATGTC 146055 || || | ||||| ||| |||| ||||||| ||| | ||| | | ||||| Sbjct 3760 CGGGCACGGTTGTCCTCCTTACCGGTGTTACGCTTCAGGAGAAGGA-ACTCAAAAATGTC 3818 Query 146056 CGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCCACCCTGGTC 146112 |||||||| || || | |||||||| | ||| || |||| || ||| |||||||| Sbjct 3819 GGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTTTCTCTTACCGCCGCCCTGGTC 3878 Query 146113 CACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGC 146152 |||| ||| | | || || | ||||| | ||| ||| Sbjct 3879 GACGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGC 3918 >seq5385 Length=1056 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 898 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 839 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| | |||||||||||||| ||| Sbjct 838 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 779 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | ||| | || ||| ||||||||| Sbjct 778 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 719 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| |||||||| || || || |||||||| ||||| Sbjct 718 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 213 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 154 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| | |||||||||||||| ||| Sbjct 153 AGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 94 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | ||| | || ||| ||||||||| Sbjct 93 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 34 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTT 131219 |||| || | ||| || ||||| || || || Sbjct 33 TCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq4492 Length=1347 Score = 127 bits (140), Expect = 2e-24 Identities = 176/245 (72%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 131 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 190 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| | |||||||||||||| ||| Sbjct 191 AGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 250 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | ||| | || ||| ||||||||| Sbjct 251 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 310 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACTTATTTTATT 131247 |||| || | ||| || ||||| || || || |||||||| ||||| | || ||| || Sbjct 311 TCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCAT-ATTTCCTTTTTT 369 Query 131248 CCTTC 131252 | ||| Sbjct 370 CTTTC 374 >seq153 Length=16899 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 9644 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 9585 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || || |||| | |||||||||||||| ||| Sbjct 9584 AGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 9525 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||| | | ||| | || ||| ||||||||| Sbjct 9524 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 9465 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| || ||||| || || || ||||| || |||||| Sbjct 9464 TCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCATG 9417 >seq7439 Length=588 Score = 104 bits (114), Expect = 2e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || || || | ||| | ||| |||||||| || |||||||| ||| Sbjct 193 CCACCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 134 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || |||||||| || ||| |||| | |||||||||||||| ||| Sbjct 133 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 74 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | ||| | || ||| ||||||||| Sbjct 73 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 14 Query 131188 TCGACGG 131194 |||| || Sbjct 13 TCGAGGG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471965876027520