Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq2334 116 5e-21 seq1411 113 6e-20 >seq2334 Length=2751 Score = 116 bits (128), Expect = 5e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 |||||||| |||| ||| ||||| || |||||||||||| ||| || || |||||||| Sbjct 675 TCCTTGCCGCCCTGCAAGCGCGTTCCGAACTGACCGTCCTGCTTCAGCAGAGGCACATTG 616 Query 126268 TTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGTCTCGCACAGGTTCTGCTCGCCG 126327 ||| ||||| |||||||||| | | ||||||| | ||| |||||||||| Sbjct 615 TTGCTCCCCACGTAGTCCTGCGCCATACCAATGATGGTCTGGATCAGCGACTGCTCGCCG 556 Query 126328 TGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGATAAACTCG 126387 || | |||| ||| |||||| ||||| || ||||||| | |||||||| ||| | Sbjct 555 TGGTGGTAGGCGGAGTGCTCGCTGACGTAACCAGACAGCTGCACCACCTTGATCGACTTG 496 Query 126388 GT 126389 || Sbjct 495 GT 494 >seq1411 Length=4569 Score = 113 bits (124), Expect = 6e-20 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 126208 TCCTTGCCTCCCTCCAACCGCGTGCCAAACTGACCGTCCGGCTCCAACAACTGCACATTG 126267 |||||||| |||| ||| ||||| || |||||||||||| ||| || || |||||||| Sbjct 4492 TCCTTGCCGCCCTGCAAGCGCGTTCCGAACTGACCGTCCTGCTTCAGCAGAGGCACATTG 4433 Query 126268 TTGGCTCCCACAAAGTCCTGCGCAAACTTGACAATGGTCTCGCACAGGTTCTGCTCGCCG 126327 ||| ||||| |||||||||| | | ||||||| | ||| |||||||||| Sbjct 4432 TTGCTCCCCACGTAGTCCTGCGCCATACCAATGATGGTCTGGATCAGCGACTGCTCGCCG 4373 Query 126328 TGCTTGTAGTCGGTCTGCTCGGCCACGTAGCCGCTCAGCTGCGCAACCTTGATAAACTCG 126387 || | ||| ||| |||||| ||||| || ||||||| | |||||||| ||| | Sbjct 4372 TGGTGGTAAGCGGAGTGCTCGCTGACGTAACCAGACAGCTGCACCACCTTGATCGACTTG 4313 Query 126388 GT 126389 || Sbjct 4312 GT 4311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611331219992800