Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq753 129 5e-25 seq153 105 6e-18 seq4492 104 2e-17 seq5385 100 2e-16 >seq753 Length=7390 Score = 129 bits (142), Expect = 5e-25 Identities = 264/389 (68%), Gaps = 5/389 (1%) Strand=Plus/Plus Query 129990 CATCAAACTCCACATTCCATCCGCT-TCGACTCGTTTCATAAACAAATCGGGTACCCACA 130048 ||||| ||||| | || || ||| | ||| || ||||| || | |||||| | ||| | Sbjct 3684 CATCAGCGTCCACTTGCCCTC-GCTCTTGACACGCTTCATGAAGAGATCGGGGATCCAGA 3742 Query 130049 GGGCGTACAACAAATCTCGCGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGTTCAA 130108 ||||||| || | ||| || || | ||||| ||| ||||||| ||||| || Sbjct 3743 GGGCGTAGAAGAGATCACGGGCACGGTTGTCCTCCTTACCGGTGTTACGCTTCAGGAGAA 3802 Query 130109 GGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTCCGTT 130168 |||| || |||||||||||||||| || || | || | || | || ||||| | | Sbjct 3803 GGAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTTTCTCT 3862 Query 130169 T---GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCCTCCA 130225 | ||| || ||||| |||| || ||| ||| || | || || | ||| | | | | Sbjct 3863 TACCGCCGCCCTGGTCGACGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGCACTA 3922 Query 130226 ATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTATGAA 130285 | ||||| | ||| ||||| || | | ||||| |||| || | |||| ||| || | Sbjct 3923 AACCGTTCGACGTCCCGTTGGTACCCGCAATGTAACTTCCGGCGGAACGAATGTTGTGCA 3982 Query 130286 CGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAGCGTTTCAT 130345 || | ||| ||||| ||| || | || || | ||||| || ||||| || | Sbjct 3983 CGTGGAAACCGATGCCACCGGCAGACTTGCTGATGATGGCGCATTCCTTCAGCGTATCGT 4042 Query 130346 AAATGCCAACGATACTGTCTTCTTTAATG 130374 | ||||| |||||||||| || || ||| Sbjct 4043 AGATGCCCTCGATACTGTCGTCCTTCATG 4071 >seq153 Length=16899 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | ||||| || || || | || || || || ||| | Sbjct 9418 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGC 9477 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || ||||| ||||||||||| || || || || || Sbjct 9478 GACACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 9537 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || |||||||| || ||| | ||||| ||||||| || |||| |||||| Sbjct 9538 CAGCGCCTCATCTTTGCCGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCCGACTACAAC 9597 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | ||| | || | || | ||||| ||| Sbjct 9598 ATCCAGAAGGAGTCCACCCTTCATCTCGTCCTCCGCCTCCGCGGTGGT 9645 >seq4492 Length=1347 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 22215 AAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAAC 22274 ||| ||||||||||| || || || | ||||| || || || | || || || || | Sbjct 361 AAATATGCAAATTTTCGTGAAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTC 302 Query 22275 CACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGA 22334 || ||| ||| | || | | || || ||||| ||||||||||| || || || || Sbjct 301 CAGCGACACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGA 242 Query 22335 TCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTA 22394 || || || || || || ||||| || ||| | || || ||||||| || |||| || Sbjct 241 CCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTGGAAGAGGGCCGCACCCTCGCCGACTA 182 Query 22395 CAACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 |||||| || || || |||||| | ||| | || | || | ||||| ||| Sbjct 181 CAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGCCTTCGCGGTGGT 130 >seq5385 Length=1056 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||||||||| || || || | |||||||| || || | || || || || ||| | Sbjct 672 ATGCAAATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGTCCAGC 731 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | || || ||||| ||||||||||| || || || || || Sbjct 732 GACACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 791 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||| || ||| | || || |||||| || |||| |||||| Sbjct 792 CAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAAGAAGGTCGCACCCTCGCCGACTACAAC 851 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || |||||| | ||| | || | || | ||||| ||| Sbjct 852 ATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGCCTTCGCGGTGGT 899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || ||||| ||||||||||| || || || || || || || || || || ||||| || Sbjct 71 AAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGTAAG 130 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 ||| | || || ||||||| || |||| |||||||| || || || |||||| | ||| Sbjct 131 CAGCTCGAAGAAGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACCCTCCAT 190 Query 22423 TTAGTTTTGCGATTGCGCGGAGGT 22446 | || | || | ||||| ||| Sbjct 191 CTCGTCCTCCGCCTTCGCGGTGGT 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419687316945445