Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3286 179 8e-40 >seq3286 Length=1922 Score = 179 bits (198), Expect = 8e-40 Identities = 490/736 (67%), Gaps = 31/736 (4%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| || ||||| | ||||||||||||||||||||| || Sbjct 1512 TCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTCCATGAAGTCGAAGGGGTTCGTC 1453 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||||| | | |||||| | || | | ||||| ||||| ||||| | Sbjct 1452 GCGTTGTAGTGCTTCGCCTCGCCAAGGGAGACCAGCAGACGGTCCGCCACGAACTCAATG 1393 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | ||||| || |||||||| ||||||| || || | | ||| |||||| Sbjct 1392 TACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCGCACGGGGAGGGACTCGCAGATG 1333 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || ||||| ||| || | || || || | || | ||| | | | |||||| Sbjct 1332 AACTCCTTCTCGATGTCCACGGCATCGGTGATGATGTTCAGCACGCGCTCGCGCGACAGC 1273 Query 251803 TTGTTCTCCA----GCTTTGAGTACAGGA-GCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 ||||||| | ||| | |||||| | || || |||| | |||||||||||||| Sbjct 1272 TTGTTCTTGATGTGGCTGT-TGTACAGCAGGCACG-CAAAGTCCGTGTGCAGACCCTCGT 1215 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || || | ||||||| | |||||| |||||||| || || ||| | |||| Sbjct 1214 CACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGGCATCACGCCGCGCTTCTTCAGCC 1155 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCT----CGACACACACCCATGCA 251973 ||||||| ||||| ||||| || ||||| | | |||| || | || |||| || Sbjct 1154 AGAAGATCGCGCAGAAGGAGCCGGAGAAGAAGATGCCCTCCACCGCCGCAAACCCGAGC- 1096 Query 251974 ACAAGGCGCT-CAGCAA--ACGACTTGTCCTGCGA-CAAGAACTTCTGTGCCCATGCTGC 252029 ||||||| | | || || || | | | ||| | || | | ||||| | || Sbjct 1095 ---AGGCGCTCCTGGAAGCTCGCCTCG-CTTCCGATCCAGCGCACC---GCCCACTCCGC 1043 Query 252030 CTTCTT-TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCAT 252088 |||||| | | | | ||||| || | ||| || | | || ||| ||| | | Sbjct 1042 CTTCTTCTGGATGCAC-GGGATCGTCTGGATCGCGTGCAGCAG---CTTCAGCTTCTCCT 987 Query 252089 C---GTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATGGATTCGT 252145 | |||| |||| || || ||||| | |||||| |||| || |||||| || Sbjct 986 CGCTGTCCGTGATGTACGTGTCCAGCAGCACAGAGTAGGTCTCGGAGTGGATGTTCTCCA 927 Query 252146 TGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTCCGTGGAAAAGT 252205 | | || |||| | | ||||| ||| || || | |||| |||| ||| Sbjct 926 TCATCAGCTGGAAGCCGTAGAACGCACGGGCCTCCGGCACCTTGACGTCCGACATGAAGC 867 Query 252206 TGTTTGCAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGCCAAGAATGGTCT 252265 | || | |||||| ||||| ||||| |||||||| || |||||| |||| | | || Sbjct 866 GCTGCGCGAGGTTCTCAATCACGATGCCGTCGCTGCCAGCGAAGAAGGCAAGCACGTACT 807 Query 252266 TGATGAAGTGACGCTC 252281 |||||||||| |||| Sbjct 806 TGATGAAGTGCTGCTC 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027732065678473