Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3286 223 6e-53 seq5385 179 7e-40 seq4492 179 7e-40 seq153 161 2e-34 seq1511 150 3e-31 seq7439 136 7e-27 seq673 87.8 3e-12 seq340 87.8 3e-12 >seq3286 Length=1922 Score = 223 bits (246), Expect = 6e-53 Identities = 599/901 (66%), Gaps = 40/901 (4%) Strand=Plus/Minus Query 9934 TCATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCT 9993 |||| || || ||||||||||| || ||| |||||||||||||| |||||| Sbjct 1550 TCATCACACCGGCCTTCTGGTAGTCACCAACCTTCTTCTCGAAGAAGTTGGTCTTGCCAG 1491 Query 9994 CGAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAAC 10053 |||||| || | |||||||||||| ||||||||| ||| | ||||| | | | Sbjct 1490 GGAGGGAGATCATCTCCATGAAGTCGAAGGGGTTCGTCGCGTTGTAGTGCTTCGCCTCGC 1431 Query 10054 CGAGTGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGT 10113 | || | | | ||||| ||||||||||| |||||||||||||||| ||||||| Sbjct 1430 CAAGGGAGACCAGCAGACGGTCCGCCACGAACTCAATGTACTGGCTCATCATCTCCGAGT 1371 Query 10114 TCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCG 10173 |||| ||||||| ||| ||||| || ||||| ||||| ||||| ||| || | || | Sbjct 1370 TCATACCAATCAGGCGCACGGGGAGGGACTCGCAGATGAACTCCTTCTCGATGTCCACGG 1311 Query 10174 CTTCCTCGACGATGCTCTTTACCACG---TCAAGGGACAGCTTGTTCTCGA----GCT-T 10225 | || || |||| || | |||| || | ||||||||||||| || ||| | Sbjct 1310 CATCGGTGATGATGTTC---AGCACGCGCTCGCGCGACAGCTTGTTCTTGATGTGGCTGT 1254 Query 10226 CGAATACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 | ||||| || |||| | | ||| || |||||||| ||| || | |||||| Sbjct 1253 TG--TACAGCAGGCACGCAAAGTCCGTGTGCAGACCCTCGTCACGGGAAATCAGCTCGTT 1196 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 | || ||| |||||||| | || || || ||||||||| || |||||||| || Sbjct 1195 GCTGAAGGTCAGGCCGGGCATCACGCCGCGCTTCTTCAGCCAGAAGATCGCGCAGAAGGA 1136 Query 10346 CCCGGAGAACAGAAGA--CCCTCCA----CGCACACCCAGGCGACGAGGCGCTCTGCGAA 10399 ||||||| |||||| ||||||| |||| ||| ||| |||||||| ||| Sbjct 1135 GCCGGAGA--AGAAGATGCCCTCCACCGCCGCAAACC----CGAGCAGGCGCTCCTGGAA 1082 Query 10400 GGAGCGGTCGCGCGAAAAGTATTTCGAGGCCCACGCTGCCTTCTTTCCCACGGCAGGGAT 10459 | |||| | | | |||||| | |||||||| | | ||||| Sbjct 1081 GCTCGCCTCGCTTCCGATCCAGCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGAT 1022 Query 10460 CGTCTCGATAGCCTCGAAGAGCTT---GTTACGCTCGGTCTCGTCCTCAATAAGAGCATC 10516 ||||| ||| || | | ||||| || |||| | |||| || | || Sbjct 1021 CGTCTGGATCGCGTGCAGCAGCTTCAGCTTCTCCTCGCT---GTCCGTGATGTACGTGTC 965 Query 10517 AAGGAGCAGGGAGTATTGCTCGCTGTGGACGCTCTCATTGTACCCCTGGTAAGCGTAGAA 10576 || |||| ||||| |||| ||||| | |||| | | |||| | ||||||| Sbjct 964 CAGCAGCACAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATCAGCTGGAAGCCGTAGAA 905 Query 10577 CATACGTGCCGAGGGGTCCGTGACTTCCTCGGCA--AAGTTGTTGTTC-AGGTTCTCCAT 10633 | ||| ||| || || |||| || || || ||| | || | |||||||| || Sbjct 904 CGCACGGGCCTCCGGCACCTTGACGTC--CGACATGAAG-CGCTGCGCGAGGTTCTCAAT 848 Query 10634 CACCATGCCATCGCTGCCTGCAAAGAAGCCGAGGATGTGCTTGATGAAGTGGCGCTCATC 10693 ||| ||||| |||||||| || |||||| | || | || |||||||||||| |||| | Sbjct 847 CACGATGCCGTCGCTGCCAGCGAAGAAGGCAAGCACGTACTTGATGAAGTGCTGCTCGCC 788 Query 10694 ATCGTTCAGTTTTTCACGCCAGTCTACCACATCCTGGTTGAGCTGGACCTCCTCCACGGT 10753 || ||| | ||| |||||| || || | || | || |||||||| || Sbjct 787 CTCCGTCA--TCTTC-TTCCAGTCCGTCAGGTCATTTCCCAGATCGATCTCCTCCAGCGT 731 Query 10754 CCAGAAAGTGGCAACGGCCTTCTTGTACATCTGGAAAATGTCGGGGTACCGGATGGGGAA 10813 ||||| | | || ||||||| ||| | |||||| ||||| |||| ||||| Sbjct 730 CCAGATGCAGCTCTCCTGCTCCTTGTACTTCTTCCAGATGTCGTGGTACTGGATCGGGAA 671 Query 10814 C 10814 | Sbjct 670 C 670 >seq5385 Length=1056 Score = 179 bits (198), Expect = 7e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||||||||| | || | || || |||||||| || |||||||| || |||| | Sbjct 898 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 839 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| ||||| | || ||||| || || Sbjct 838 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 779 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 ||||| |||||||| |||||||| ||||| ||| |||||||||||| |||| | || || Sbjct 778 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTC-GCTGGACTCGAC 720 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || |||||| || || ||||||||||| ||||| || ||||| Sbjct 719 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 165 bits (182), Expect = 2e-35 Identities = 166/213 (78%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||||||||| | || | || || |||||||| || |||||||| || |||| | Sbjct 213 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 154 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| ||||| | || ||||| || || Sbjct 153 AGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 94 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG-ATTCTAC 68413 ||||| |||||||| |||||||| ||||| ||| |||||||||||| |||| | || || Sbjct 93 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTC-GCTGGACTCGAC 35 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTT 68446 || | || |||||| || || ||||||||||| Sbjct 34 CTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq4492 Length=1347 Score = 179 bits (198), Expect = 7e-40 Identities = 178/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||||||||| | || | || || |||||||| || |||||||| || |||| | Sbjct 131 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 190 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| ||||| | || ||||| || || Sbjct 191 AGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 250 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| |||||||| ||||| ||| |||||||||||| ||| || || || Sbjct 251 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTC-GCTGGACTCGAC 309 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || |||||| || || ||||||||||| ||||| || ||||| Sbjct 310 CTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCAT 357 >seq153 Length=16899 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | || || |||||||| || |||||||| || |||| | Sbjct 9644 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 9585 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || ||||| | || ||||| || || Sbjct 9584 AGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 9525 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| |||||||| ||||| ||| |||||||||||| ||| || || || Sbjct 9524 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTC-GCTGGACTCGAC 9466 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || |||||| || || || |||||||| ||||| || ||||| Sbjct 9465 CTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq1511 Length=4254 Score = 150 bits (166), Expect = 3e-31 Identities = 327/488 (67%), Gaps = 1/488 (0%) Strand=Plus/Minus Query 268258 CCACATTGCTTCGACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCC 268317 |||||| | | ||||||||| |||||||||||| || || |||| | ||| || Sbjct 3326 CCACATGCCATACACATAGTCCTTCGCATGGCCCCAGTCTCGGAGCGCGTTGACGTTACC 3267 Query 268318 GAGGAACAGGCATTTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCG 268377 ||||| || ||||||||| | |||| | ||| | |||| || ||| Sbjct 3266 GAGGAGGAGTTGCTTCTGCTTGTTGTGCTTGATGCGGACGGCGGCGCGGACAATCTTTTT 3207 Query 268378 GGTCACGAACGTCTCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGC 268437 ||||||||||||| | ||||| | ||| |||||| || ||||| || ||||||| ||| Sbjct 3206 GGTCACGAACGTCGCACCACGGCGGGGGGACTCGTGATTAAAGAGAATACCGTTGCTCGC 3147 Query 268438 GAACATGCCATATGCCTCACGGTAGTTCACGACCGTCCAGTATGCAAACATCTTTGCAAC 268497 ||||| || | ||| ||||||||| ||| ||||| | || | | ||| || || Sbjct 3146 AAACATATTGTACGACTCGCGGTAGTTCTTGACAATCCAGAAGGCGTAGAGCTTGGCGAC 3087 Query 268498 TGCGTACGGA-GAACGTGGATGGAAGGGCGTCGTGATCTTTTGAGGGATTTCTCGGACTT 268556 ||||| ||| || || | |||||| || || || ||||| || | || Sbjct 3086 GGCGTAGGGACTGGCGGGGGTAGAAGGGGGTGGTCTCGGACTGCGGGATCTCCTGCACGA 3027 Query 268557 TGCCAAAGAGCTCGGAGGTCGATGCTTGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGA 268616 ||| |||||||| ||| || ||||| ||||| | || || || ||| | Sbjct 3026 GGCCGTAGAGCTCGCTGGTGGAGGCTTGATAGAAGCGGCACTTCTTCTCCAGTCCGTTGG 2967 Query 268617 TTCGGATTGCCTCGAGCAAACGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCG 268676 ||||| || ||||| | || || || ||||| ||||| | | || || |||| Sbjct 2966 AGCGGATGGCGTCGAGAATCTTGAGCGTGCCGATGCCGTCCACCTGACCGGTGTAGTCCG 2907 Query 268677 GCATCTCGAATGACACCTGGACATGGCTCTGGGCGCCCAGGTTATAAACCTCATCCGGTT 268736 | | ||||| || |||| ||| ||| ||||||| | ||||| || | |||||||| | Sbjct 2906 GGGTTTCGAAGGAGACCTTGACGTGGGACTGGGCGGCTAGGTTGTAGATTTCATCCGGCT 2847 Query 268737 TGACCTGC 268744 |||||| Sbjct 2846 GCACCTGC 2839 >seq7439 Length=588 Score = 136 bits (150), Expect = 7e-27 Identities = 148/194 (76%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || ||||| ||||| | || | || || |||||||| || |||||||| || |||| | Sbjct 193 CCACCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 134 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| |||||||| ||||| | || ||||| || || Sbjct 133 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 74 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||| |||||||| || ||||| ||||| ||| |||||||||||| ||| || || || Sbjct 73 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTC-GCTGGACTCGAC 15 Query 68414 TTCCAAGGTGATGG 68427 || | || ||||| Sbjct 14 CTCGAGGGCGATGG 1 >seq673 Length=7880 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 3915 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 3858 >seq340 Length=11891 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 156 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921530779213160