Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3286 361 1e-94 seq753 293 4e-74 >seq3286 Length=1922 Score = 361 bits (400), Expect = 1e-94 Identities = 609/869 (70%), Gaps = 17/869 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| || |||| ||||||||| | ||||||| || | || || || |||||| Sbjct 676 GATCCAGTACCACGACATCTGGAAGAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCT 735 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 |||||||| || |||| || ||| | | | |||| || || | ||| ||| | Sbjct 736 GGAGGAGATCGATCTGGGAAATGACCTGACGGACTGGAAGAAGATGACGGAGGGCGAGCA 795 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 | ||| |||| || | || ||||||||||| | | |||||||| || | |||||| Sbjct 796 GCACTTCATCAAGTACGTGCTTGCCTTCTTCGCTGGCAGCGACGGCATCGTGATTGAGAA 855 Query 42464 CCTGGC-CACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGC 42521 ||| || || | | |||||| || || || ||||| || ||| ||||||||| Sbjct 856 CCTCGCGCAGC-GCTTCATGTCGGACGTCAAGGTGCCGGAGGCCCG-TGCGTTCTACGGC 913 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581 |||||| | || |||||| | ||||| ||| ||| | ||||| |||||||| Sbjct 914 TTCCAGCTGATGATGGAGAACATCCACTCCGAGACCTACTCTGTGCTGCTGGACACGTAC 973 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGG--GCTGTTCAAGGCCATGGAGACGATGCCCTGCA 42639 ||| ||| || ||| | | | |||| | | || || ||||||| || |||| Sbjct 974 ATCACGGACAGCGAGGAGA--AGCTGAAGCTGCTGCACGCGATCCAGACGATCCCGTGCA 1031 Query 42640 TCAAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCG 42699 || ||||||||||||| |||||| | |||||||| || ||| || | ||| | Sbjct 1032 TCCAGAAGAAGGCGGAGTGGGCGGTGCGCTGGATCGGAAG---CGAGGCGAGCTTCCAGG 1088 Query 42700 AGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCA 42759 || | ||| | | ||| | || || ||||||||||||||||| ||| ||||| | | | Sbjct 1089 AGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCGA 1148 Query 42760 TCTTCTGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATC 42818 |||||||||| ||| || || || ||||||||| || |||||| ||||| || || Sbjct 1149 TCTTCTGGCTGAAGAAGCGCGGCGT-GATGCCCGGCCTGACCTTCAGCAACGAGCTGATT 1207 Query 42819 AGCAGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGG 42878 | | |||||||| ||||| | ||||||||| ||||| |||| | |||||| ||| | Sbjct 1208 TCCCGTGACGAGGGTCTGCACACGGACTTTGCGTGCCTGCTGTACAACAGCCACATCAAG 1267 Query 42879 CACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 |||||| ||| ||||| || | | ||||||||| || |||||||| ||||||||| Sbjct 1268 AACAAGCTGTCGCGCGAGCGCGTGCTGAACATCATCACCGATGCCGTGGACATCGAGAAG 1327 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||| || |||| || |||||| |||| | || |||||| || | ||| || Sbjct 1328 GAGTTCATCTGCGAGTCCCTCCCCGTGCGCCTGATTGGTATGAACTCGGAGATGATGAGC 1387 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCG--CCTCT 43056 ||||||| ||| ||| || |||| ||| ||| | | || || || | || Sbjct 1388 CAGTACATTGAGTTCGTGGCGGACCGTCTGCTGGTCTCCCTTGG--CGAGGCGAAGCACT 1445 Query 43057 ACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACT 43116 ||||| || || |||||||||||| ||||||| ||||| | ||||||||||||| Sbjct 1446 ACAACGCGACGAACCCCTTCGACTTCATGGAGATGATCTCCCTCCCTGGCAAGACCAACT 1505 Query 43117 TTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 | ||||||||| || | ||||||||| Sbjct 1506 TCTTCGAGAAGAAGGTTGGTGACTACCAG 1534 >seq753 Length=7390 Score = 293 bits (324), Expect = 4e-74 Identities = 1113/1726 (64%), Gaps = 68/1726 (4%) Strand=Plus/Plus Query 243735 CCACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCT 243794 ||||| |||||| || || |||||||||| ||| | ||||||||||||||||||| Sbjct 2474 CCACGGTGAACTTGATGGCATCGACGGCGGCGCGGGTGCGGAGGTAGTACATGCCGGTCT 2533 Query 243795 TGAGTCC--ACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTT 243852 |||| || |||| |||| ||||| |||||||| || | || | ||||| Sbjct 2534 TGAGGCCGGACTG--CCAGCAGTGGAAGTGCATGGAGGTGATCTGG-----CCGGAGCTG 2586 Query 243853 TGGGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCG 243912 ||| | || ||| ||||| || | |||||| |||||| | | || || Sbjct 2587 GGGGAC----TC---CAGGAAGAGATTCATGGACTGAGACTGGTCAATATACTTGGCGCG 2639 Query 243913 CTCTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGG 243972 | |||| |||| || || | ||| | ||||| | | || ||||| Sbjct 2640 GGCGGCGGACATGTCAATCAGCTTGCGCTGCGGAATCTCCCAAACGGTGCGGTAGAGCTC 2699 Query 243973 CTTGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTG 244032 ||| || | || |||| || ||||| | | || ||||| ||| | ||||| | Sbjct 2700 CTTCAGATCATCCGGGATACCGTCGATTCGCAGGACGGAGCCGTTGAAGGTGATGATTTC 2759 Query 244033 GGTGCGCATGTTATCGTTCCACAGGCC-CAAGCGCTCCAGCGCCTCGACCAGGTGCCTGT 244091 | | |||| || || |||||||| || | ||| | || ||| ||| |||| ||| Sbjct 2760 GTTACGCAGCTTCTCATTCCACAGACCACGGGCGATG-AGGTCCTTGACAAGGTATTTGT 2818 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 |||| ||| | ||||| || |||| ||||| ||| | |||| || ||| |||| Sbjct 2819 TCACAACCGGGAACTCCCCACTCAGCGTACGGCGGACGTAAATGTTGGTGGTGAAGGGCT 2878 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| || ||| |||| || || || || ||| || || ||||| |||| ||||| Sbjct 2879 CGAAGCACTCATTGTTACCGAGAATTTGACTGGTGGAGGCGGTGGGCATCGGCGCCACCA 2938 Query 244212 GCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACA 244271 |||| ||| | || ||| | ||| || ||| | || ||| ||||| ||| Sbjct 2939 ACAGAGAGTTTCGCATACCGGTCGTCTTGACGCGCTCCTTCAGGGCGTCCCAGTTCCAGC 2998 Query 244272 TGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGA 244331 ||| | || || | || |||| | || |||||||| || || | | | Sbjct 2999 GGCC-----GCTCACCG-GCTTCTTCTCCCAGAGATCGAACTGCAGAAGGCCTTGGGAGG 3052 Query 244332 CGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCG 244390 |||||||||| |||| || || || || | |||| | || | | Sbjct 3053 CGGGGCTGCCGGGAAAGGTTTCATACGGTCCCTCCACCGCCGCCAAGTCCACGGAGGAC- 3111 Query 244391 TCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGG-GCCTTGCC 244449 || | |||||||||||||||||||||||||| || ||||| ||| | |||| | Sbjct 3112 TCCACCGCGGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTCAAC-CGCTGCGCCTCCTC 3170 Query 244450 GCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCC 244509 || |||||||||| || | | || ||| |||| |||| ||||||||||||| ||| Sbjct 3171 GCTCGTGAAGGGGAGGCGAAGGAGAATAAAGGCGTCCGCCAACCCCTGCACGCCGAGGCC 3230 Query 244510 GATGGGTCTGTGTCGCTTGTTGGAGCGCATGGC---TTCGGGCACGGGGTAAAAGTTGCC 244566 || || | || |||| |||| ||| |||| ||| ||||||||| |||||| Sbjct 3231 GACCGGGCGGTTTCGCATGTTACTGCGTCTGGCCGTTTC---CACGGGGTAGTAGTTGCG 3287 Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCG-GACGACGTCGGCCAGCAGCTGAA 244625 ||| || || |||||| ||| ||| | | | | | ||| ||| ||| ||| Sbjct 3288 GTCAATGACTCGGTTGAGATTGTAGGTCA-CGTCCTTGGTGACCTCGTAGAGCTTCTGGT 3346 Query 244626 AGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGC 244685 ||| | || | ||||| | ||| || || | |||||||| | Sbjct 3347 GGTCAAAGACGCCC---TTCTCGGTG-------TCC--ACGAAGCGGGGGAGGGCGATGG 3394 Query 244686 TGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGA 244745 ||||| |||||| || ||| ||| ||| | ||||||||| | |||||||||||| | Sbjct 3395 AGGCCAAGTTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAATCTCGGTGCACA 3454 Query 244746 GGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCT 244805 |||| |||||||||||||||||| | | || |||||||| |||||| | ||||| Sbjct 3455 GGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGGTTGCAAGAGTCCT 3514 Query 244806 TGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGT 244865 |||| |||||||| || | |||||||| | ||||| | || | | | ||| || | Sbjct 3515 TGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATGGCGAACCACAGCT 3574 Query 244866 CCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCT 244925 | || || || | | || |||| | |||||| |||| || Sbjct 3575 CTTGCGCGGCGATGGTGCGGATGCCCAGACCCTGTCTCTCGTACTCCTCGTACTTCTTCT 3634 Query 244926 CGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCC 244985 | ||||| ||| | ||| ||||||| ||| ||| ||| || ||| Sbjct 3635 CAAACTCCTCGCCGTGGCAGTCGCTCAGGCCGGTGCAGATATGGGGGTCCATCAGCGTCC 3694 Query 244986 ACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGA 245045 ||| ||| || |||||| | || ||||||||| ||||||||||||||||| | ||||| Sbjct 3695 ACTTGCCCTCGCTCTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGTAGAAGA 3754 Query 245046 GGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGA 245105 | || | || | | || ||| || ||||| | |||| | || ||||| | Sbjct 3755 GATCACGGGCACGGTTGTCCTCCTTACCGGTGTTACGCTTCAGGAGAAGGAACTCAAAAA 3814 Query 245106 CGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCT 245165 |||| ||||||||||||| | |||||| || | ||| || | ||| ||| |||| Sbjct 3815 TGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTTTCTCTTACCGCCGCCCT 3874 Query 245166 GGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTA 245221 |||| | | | || ||| || | | ||| || | ||||||| ||||| Sbjct 3875 GGTCGA----CGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGCACTAAACCGTTC 3930 Query 245222 GAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGA--GGTTGCTGATGGACA 245279 || |||||||| ||| ||||| ||| | | || | || || || || Sbjct 3931 GACGTCCCGTTGGTACCCGCAATGTA-----ACTTCCGGCGGAACGAATGTTG-TGCACG 3984 Query 245280 TG----CCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCT 245335 || || | || ||||| |||| ||||| |||||| ||| | || || Sbjct 3985 TGGAAACCGATGCCACCGGCAGACTTGCTGATGATGGCGCATTCCTTCAGCGTATCGTAG 4044 Query 245336 ATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG 245395 |||||||| || ||||| ||||||| | || ||||| || || ||| || ||| Sbjct 4045 ATGCCCTCGATACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAACTCATCTGAGGGTTG 4104 Query 245396 GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGC 245441 ||| | | | |||||| || |||||| |||||||||| ||||||| Sbjct 4105 GGGGTACCGGCGTTGAAGAGGGTGGGGGTGGCGTGGGTGAAGTAGC 4150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944245320879280