Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq5385 140 8e-28 seq4492 140 8e-28 seq153 140 8e-28 seq7439 114 3e-20 >seq5385 Length=1056 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 898 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 839 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || |||||||| || ||||| || ||| Sbjct 838 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 779 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || |||||||| || || | ||||| || || || Sbjct 778 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 719 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 718 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 213 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 154 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || |||||||| || ||||| || ||| Sbjct 153 AGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 94 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || |||||||| || || | ||||| || || || Sbjct 93 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 34 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTT 288458 ||||| | ||| ||||| ||||| || ||||| Sbjct 33 TCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq4492 Length=1347 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||||||| || | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 131 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 190 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || |||||||| || ||||| || ||| Sbjct 191 AGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 250 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || |||||||| || || | ||||| || || || Sbjct 251 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 310 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 311 TCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCAT 357 >seq153 Length=16899 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || |||||||||| ||| || || ||||| || ||||||||| Sbjct 9644 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 9585 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || ||||| || ||||| || ||| Sbjct 9584 AGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 9525 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || |||||||| || || | ||||| || || || Sbjct 9524 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 9465 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| | ||| ||||| ||||| || ||||| ||||| || ||||| Sbjct 9464 TCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq7439 Length=588 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || |||||||| | ||| || || ||||| || ||||||||| Sbjct 193 CCACCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 134 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || |||||||| || ||||| || ||| Sbjct 133 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 74 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || || |||||||| || || | ||||| || || || Sbjct 73 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 14 Query 288427 TCGAGCGTGAT 288437 ||||| | ||| Sbjct 13 TCGAGGGCGAT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179534195797134