Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3286 114 3e-20 >seq3286 Length=1922 Score = 114 bits (126), Expect = 3e-20 Identities = 282/418 (67%), Gaps = 15/418 (4%) Strand=Plus/Plus Query 243346 TTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCT--A 243403 |||||||| ||||| |||||| ||| || |||||||| ||||| | | || | Sbjct 1139 TTCTGCGCGATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCCGGCCT--GACCTTCAGCA 1196 Query 243404 ACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTTCG-GTGAGCTTATGTATTCA 243462 ||||| | || || |||||||| || ||| | || | ||| || |||| || Sbjct 1197 ACGAGCTGATTTCCCGTGACGAGGGTCTGCACACGGACTTTGCGTGC-CTGCTGTA--CA 1253 Query 243463 A-AGC----TCCAGAACAAGCTACCATTCGAAACGGTCAAACAAATCATCACAGAAGCAG 243517 | ||| || |||||||||| | ||| || | |||||||| || || | Sbjct 1254 ACAGCCACATCAAGAACAAGCTGTCGCGCGAGCGCGTGCTGAACATCATCACCGATGCCG 1313 Query 243518 TTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACT 243577 | || | ||| ||||| ||||| ||||| | | || || || ||||| ||||||| Sbjct 1314 TGGACATCGAGAAGGAGTTCATCTGCGAGTCCCTCCCCGTGCGCCTGATTGGTATGAACT 1373 Query 243578 CTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTT 243637 | || | ||| | |||||||| || ||||| || ||||| | | || | ||||| Sbjct 1374 CGGAGATGATGAGCCAGTACATTGAGTTCGTGGCGGACCGTCTGCTGGTCTCCCTTGGCG 1433 Query 243638 ATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAG 243697 | | ||| |||||| | | ||||||||| | ||| |||||| | || || || | | Sbjct 1434 AGGCGAAGCACTACAACGCGACGAACCCCTTCGACTTCATGGAGATGATCTCCCTCCCTG 1493 Query 243698 GGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACGCCCTGGTGTGATGA 243754 | || || ||||||||||| ||| || |||| || || | | || |||||||||| Sbjct 1494 GCAAGACCAACTTCTTCGAGAAGAAGGTTGGTGACTACCAGAAGGCC-GGTGTGATGA 1550 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102767618940550