Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq4492 116 4e-21 seq153 116 4e-21 seq5385 111 2e-19 seq7439 87.8 2e-12 seq799 87.8 2e-12 >seq4492 Length=1347 Score = 116 bits (128), Expect = 4e-21 Identities = 145/196 (74%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 166 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAA 225 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 226 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 284 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 || | | |||||||| || || || |||| | |||||| ||||| || || ||||| | Sbjct 285 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCA 344 Query 42196 CAAAGATTTGCATTTT 42211 | || |||||||| || Sbjct 345 CGAAAATTTGCATATT 360 >seq153 Length=16899 Score = 116 bits (128), Expect = 4e-21 Identities = 143/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || ||||||||||| || || Sbjct 9609 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAA 9550 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 9549 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 9491 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 || | | |||||||| || || || |||| | |||||| ||||| || || ||||| | Sbjct 9490 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCA 9431 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 9430 CGAAGATTTGCAT 9418 >seq5385 Length=1056 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 863 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAA 804 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 803 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 745 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 || | | |||||||| || || || |||| | |||||| || || || || ||||| | Sbjct 744 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCA 685 Query 42196 CAAAGATTTGCAT 42208 | || |||||||| Sbjct 684 CGAAAATTTGCAT 672 Score = 102 bits (112), Expect = 9e-17 Identities = 131/178 (74%), Gaps = 2/178 (1%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 178 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAA 119 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 ||||| ||||||||||| | || | || |||||||||| ||| | || | || | Sbjct 118 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGT 60 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTT 42193 || | | |||||||| || || || |||| | |||||| ||||| || || ||||| Sbjct 59 TCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq7439 Length=588 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || || || || || | || || ||||||||||| ||||| Sbjct 158 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAA 99 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||| ||||||||||| | || | || |||||||||| ||| || || | | Sbjct 98 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 39 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGG 42174 | | | |||||||| || || || |||| | ||||| Sbjct 38 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGG 1 >seq799 Length=7053 Score = 87.8 bits (96), Expect = 2e-12 Identities = 91/118 (77%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 41999 CACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATC 42058 |||||| || | ||| |||||| || || ||||| || || || ||| || | || || Sbjct 131 CACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTCGGCCC-TCCTC 73 Query 42059 TAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCC 42116 ||||||||||||||||| || || ||||||||||| | || | || |||||||||| Sbjct 72 GAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543158797857520