Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq4492 114 1e-20 seq153 114 1e-20 seq5385 109 5e-19 seq7439 89.7 5e-13 >seq4492 Length=1347 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||| | || || || || || |||||||| || || Sbjct 130 ACCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 189 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| |||||||| ||||| | ||||| ||||||||||| || || Sbjct 190 GAGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 249 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || ||| | || || | || || || Sbjct 250 GATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGAC 309 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | | | |||||||||||| | || || |||||||||||||| || Sbjct 310 CTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCATATT 360 >seq153 Length=16899 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||||| || || || || || |||||||| || || Sbjct 9645 ACCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 9586 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | || || |||||||| |||||| | ||||| ||||||||||| || || Sbjct 9585 GAGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGG 9526 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || ||| | || || | || || || Sbjct 9525 GATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGAC 9466 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | | | |||||||||||| | || || ||||| |||||||| Sbjct 9465 CTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq5385 Length=1056 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||| | || || || || || |||||||| || || Sbjct 899 ACCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 840 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| |||||||| ||||| | ||||| ||||||||||| || || Sbjct 839 GAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 780 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || ||| | || || | || || || Sbjct 779 GATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGAC 720 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | | | |||||| ||||| | || || |||||||||||||| Sbjct 719 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||| | || || || || || |||||||| || || Sbjct 214 ACCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 155 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| |||||||| ||||| | ||||| ||||||||||| || || Sbjct 154 GAGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 95 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || || || || || ||| || ||| | || || | || || || Sbjct 94 GATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGAC 35 Query 64396 TTCTACAGTTACGGTCTTGCCGGT 64419 || | | | |||||||||||| Sbjct 34 CTCGAGGGCGATGGTCTTGCCGGT 11 >seq7439 Length=588 Score = 89.7 bits (98), Expect = 5e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | || || ||||| | || || || || || |||||||| || || Sbjct 194 ACCACCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGC 135 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || |||||| | ||||| |||||||| ||||| | ||||| ||||||||||| || || Sbjct 134 GAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGG 75 Query 64336 AATTCCTTCTTTTTCTTGTATTTT 64359 || || || || || || || || Sbjct 74 GATGCCCTCCTTGTCCTGGATCTT 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499595129061320