Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq753 246 3e-60 seq3286 167 2e-36 seq5385 91.5 1e-13 seq153 91.5 1e-13 >seq753 Length=7390 Score = 246 bits (272), Expect = 3e-60 Identities = 854/1308 (65%), Gaps = 56/1308 (4%) Strand=Plus/Plus Query 153075 TTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTC 153134 ||| | ||||| || || ||| | || || || || || |||||| |||| ||||| Sbjct 2863 TTGGTGGTGAAGGGCTCGAAGCACTCATTGTTACCGAGAATTTGACTGGTGGAGGCGGTG 2922 Query 153135 GGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCG-CTCGAATGTCGTCCTTCAA 153193 ||||| ||||||||||| ||| || |||| ||| || || || | ||||||| Sbjct 2923 GGCATCGGCGCCACCAACAGAGAGTTTCGCATACCGGTCGTCTTGACGCGC-TCCTTCAG 2981 Query 153194 CGCCTGCCAATCCCACAG--CGCCGAC-GGTGTCGCGTTCCACATGTCGTACTGTAACAC 153250 || | ||| | ||| | ||| || || || | ||| | ||| |||| | | Sbjct 2982 GGCGTCCCAGTTCCAGCGGCCGCTCACCGGCTTCTTCTCCCAGAGATCGAACTGCAGAAG 3041 Query 153251 TCCTCGACTGGCGGGACTGCCGGCAAACGT-----ACTGTAGCTGCCGTCGCGTTGGGCC 153305 ||| | |||||| ||||||| ||| || || || || || ||| ||| Sbjct 3042 GCCTTGGGAGGCGGGGCTGCCGGGAAAGGTTTCATACGGTCCCT-CCACCGCC----GCC 3096 Query 153306 AGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA 153365 | || | | ||| | |||| | ||||| ||||| ||| ||| | | || | Sbjct 3097 AAGTCCACGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTCA-- 3154 Query 153366 ACGGC--CGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGAC 153423 || || ||| || |||||| | | || | ||| || || | ||||||||| |||| | Sbjct 3155 ACCGCTGCGCCTCCTCGCTCGTGAAGGGGAGGCGAAGGAGAATAAAGGCGTCCGCCAACC 3214 Query 153424 CCTGGATACCGACGCCGATGGGTCGATGCTTCTC--GTTGCTGCGCCTCGCGCTCGCTAT 153481 |||| | |||| ||||| || || | ||| | ||| ||||| || || | | | Sbjct 3215 CCTGCACGCCGAGGCCGACCGGGCGGT--TTCGCATGTTACTGCGTCTGGCCGTTTCCAC 3272 Query 153482 GGGATAGTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGC 153541 ||| |||| ||||| || || | | |||||| ||| ||| | || || | | | Sbjct 3273 GGGGTAGTAGTTGCGGTCAATGACTCGGTTGAGATTGTAGGTCACGTCCTTGGTGACCTC 3332 Query 153542 CTTAAGTTTCTCGAAATCATAGGT-CATTTCGTCGACGCGTACGCATCGATTCACGGCAA 153600 | || |||| | ||| || | ||| ||| | ||| | || | ||| | Sbjct 3333 GTAGAGCTTCTGGTGGTCAAAGACGCCCTTC-TCGGTGTCCACGAAGCGGGGGAGGGCGA 3391 Query 153601 TAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGC 153660 | || |||| || || || |||||||| || | | |||||| || ||||||| || Sbjct 3392 TGGAGGCCAAGTTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAATCTCGGTGC 3451 Query 153661 AGAGGTTGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGT 153720 | |||||| ||| || ||| ||||| ||||| ||| ||| || || ||||| | || Sbjct 3452 ACAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGGTTGCAAGAGT 3511 Query 153721 CTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATA---AACCTAT 153777 | ||| | |||||| | || | |||||||| || || | || | || |||| Sbjct 3512 CCTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATGGCGAACCA-- 3569 Query 153778 GCAGGTCCTGCGCTCGCACCCGCTGCCGATAGC--GGCCCTCGCTCTCGTATCGCTCGTA 153835 ||| || ||||| | | ||| ||| | | |||| |||||||| |||||| Sbjct 3570 -CAGCTCTTGCGCGGCGAT--GGTGCGGATGCCCAGACCCTGTCTCTCGTACTCCTCGTA 3626 Query 153836 CAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACAT 153895 | ||||||||| ||||||| ||||||| ||||||| || ||| || ||| Sbjct 3627 CTTCTTCTCAAACTCCTCGCCGTGGCAGTCGCTCAGGCCGGTGCAGATATGGGGGTCCAT 3686 Query 153896 CAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGC 153955 ||||| |||| | | ||| ||||| || |||||| ||||| || | |||||| || Sbjct 3687 CAGCGTCCACTTGCCCTCGCTCTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGC 3746 Query 153956 GTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCAC 154015 ||| | ||| || || || | |||||| || |||| || ||||| ||| | Sbjct 3747 GTAGAAGAGATCACGGGCACGGTTGTCCTCCTTACCGGTGTTACGCTTCAG---GAGAAG 3803 Query 154016 G--CT-ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTT 154072 | || | | ||||||||||||||||| || | ||||||||| | |||||| || | ||| Sbjct 3804 GAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTTTCTCTT 3863 Query 154073 ---TCCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAG 154129 |||||||| ||||||| || | |||| || | ||||| | ||| || | | Sbjct 3864 ACCGCCGCCCTGGTCGACGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGCACTAA 3923 Query 154130 GCCGCTTGCGGTGCCGTTGGT---CGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATG 154186 ||| | | || |||||||| || | || | || ||| || || | | || Sbjct 3924 ACCGTTCGACGTCCCGTTGGTACCCGCA---ATGTAACTTCCGGCGGAACGAATGTTGTG 3980 Query 154187 CACGTTAACGCCAATGCCGCCGCCGTACTT--TGAT-ATGGCAGCGCAGTCGCCCAGCGT 154243 ||||| | || ||||| ||| | |||| |||| ||| ||||| || |||||| Sbjct 3981 CACGTGGAAACCGATGCCACCGGCAGACTTGCTGATGATG---GCGCATTCCTTCAGCGT 4037 Query 154244 CCTGTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTG 154303 ||||||||| ||||| || ||||| | | | | |||||| || |||| ||| || Sbjct 4038 ATCGTAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAACTCATCTG 4097 Query 154304 CGGAATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAA 154351 || || | || || || ||||||||||| | ||||| || || Sbjct 4098 AGGGTTGGGGGTACCGGCGTTGAAGAGGGTGGGGGTGGCGTGGGTGAA 4145 >seq3286 Length=1922 Score = 167 bits (184), Expect = 2e-36 Identities = 358/524 (68%), Gaps = 11/524 (2%) Strand=Plus/Plus Query 52304 GCTGCTGAATGCGTTCGAGCACG-TGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGA 52362 ||||||| | ||| || || ||| | |||||| | | || ||||| ||||||| || Sbjct 1000 GCTGCTGCACGCGATCCAG-ACGATCCCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGC 1058 Query 52363 AGTGGATCGAGAGCGACACCGCCACGCTGGCCG-AGCGCATGGTGGCCTTCGCCATAGTC 52421 ||||||| ||||| || | ||| | | ||||| || | | || || || Sbjct 1059 GCTGGATCGGAAGCGAG---GCGA-GCTTCCAGGAGCGCCTGCTCGGGTTTGCGGCGGTG 1114 Query 52422 GAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATA 52481 |||||| | || || |||||| ||| ||| ||||| | | || | | ||| | Sbjct 1115 GAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCGATCTTCTGGCTGAAGAAGCGCGGCGTG 1174 Query 52482 ATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGAC 52541 |||||||||||||| |||||||||||| |||| || || ||||| || |||||||||||| Sbjct 1175 ATGCCCGGCCTGACCTTCAGCAACGAGCTGATTTCCCGTGACGAGGGTCTGCACACGGAC 1234 Query 52542 TTTGCGTGCCTCTACTACAAGACGCGCGTGACCGAAAAATTGGATTCG-GA-CACGATCC 52599 ||||||||||| ||||| | | | | | ||| || | || || | || | | Sbjct 1235 TTTGCGTGCCTGCTGTACAACAGCCACATCA-AGAACAAGCTGTCGCGCGAGCGCG-TGC 1292 Query 52600 TGAGCATGTTCAAGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGG 52659 ||| ||| ||| || || |||| ||||| |||||||| | | | || || | Sbjct 1293 TGAACATCATCACCGATGCCGTGGACATCGAGAAGGAGTTCATCTGCGAGTCCCTCCCCG 1352 Query 52660 TCGAGCTGCTGGGCATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATC 52719 | ||| | || |||||| || || ||| || ||||||| ||||| |||||||| | Sbjct 1353 TGCGCCTGATTGGTATGAACTCGGAGATGATGAGCCAGTACATTGAGTTCGTGGCGGACC 1412 Query 52720 GTCTGTTGGTGCAGCTCGGGCAGCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTA 52779 ||||| |||| || || || | ||| ||| |||||| || || || || || | Sbjct 1413 GTCTGCTGGTCTCCCTTGGCGAGGCGAAGCACTACAACGCGACGAACCCCTTCGACTTCA 1472 Query 52780 TGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAG 52823 || | | || || || |||||||||||||| ||||||||| Sbjct 1473 TGGAGATGATCTCCCTCCCTGGCAAGACCAACTTCTTCGAGAAG 1516 >seq5385 Length=1056 Score = 91.5 bits (100), Expect = 1e-13 Identities = 141/199 (71%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || || ||||| || ||||||| Sbjct 865 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCG 806 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| || ||||| |||||||| || || || || ||||| ||| | || | || | Sbjct 805 AAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC-CTGAATCTTAGCCTTCAC 747 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||||| | ||||| ||||||| | | || ||||| || || || || Sbjct 746 GTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTT 687 Query 138600 TACAAAAATCTGCATGGCT 138618 || ||||| ||||| ||| Sbjct 686 CACGAAAATTTGCATAGCT 668 >seq153 Length=16899 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || |||||||| || ||||||| | Sbjct 9611 GACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCA 9552 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| || ||||| |||||||| || || || || ||||| ||| | || | || | Sbjct 9551 AAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC-CTGAATCTTAGCCTTCAC 9493 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | ||||||| | ||||| ||||||| | | || || || || || || || Sbjct 9492 GTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTT 9433 Query 138600 TACAAAAATCTGCATGG 138616 || || || ||||||| Sbjct 9432 CACGAAGATTTGCATGG 9416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496213065314160