Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq3286 132 5e-26 seq753 125 7e-24 seq5385 102 8e-17 seq4492 98.7 9e-16 seq153 93.3 4e-14 seq7439 86.0 6e-12 >seq3286 Length=1922 Score = 132 bits (146), Expect = 5e-26 Identities = 279/408 (68%), Gaps = 6/408 (1%) Strand=Plus/Plus Query 47160 GTCGAGGGCGTCTTCTTCTCGGGCAGCTT-TGCGGCGATATTTTACATGAAAACCAAAGG 47218 || |||||| |||||||||| ||| ||| |||| |||| || | |||| | || Sbjct 1112 GTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCG-CGATCTTCTGGCTGAAGAAGCGCGG 1170 Query 47219 AGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCACAC 47278 || ||||||||||| || || ||||||||||| || || | ||||| || |||||||| Sbjct 1171 CGTGATGCCCGGCCTGACCTTCAGCAACGAGCTGATTTCCCGTGACGAGGGTCTGCACAC 1230 Query 47279 CAACTTTGCCTGTCTCTACTACAACA-CTAGAGTCGATCAAAAGTTGGACGTGCCCAC-C 47336 ||||||| || || ||||||| | | | || | | ||| | | || || | | Sbjct 1231 GGACTTTGCGTGCCTGCTGTACAACAGCCACA-TCAAGAACAAGCT-GTCGCGCGAGCGC 1288 Query 47337 GTCAGCGACATGTTTGCCGAAGCCGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTG 47396 || |||| | |||| ||||| | ||| |||| |||||| || |||| | || Sbjct 1289 GTGCTGAACATCATCACCGATGCCGTGGACATCGAGAAGGAGTTCATCTGCGAGTCCCTC 1348 Query 47397 CCCGAATCTTTAGTGGGAATGAACGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCC 47456 |||| | | || |||||| ||||||||||||| ||||||| || || || || Sbjct 1349 CCCGTGCGCCTGATTGGTATGAACTCGGAGATGATGAGCCAGTACATTGAGTTCGTGGCG 1408 Query 47457 GACCGCCTGCTCGTTCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAG 47516 ||||| ||||| || || | | ||| ||| || | ||| || ||||| Sbjct 1409 GACCGTCTGCTGGTCTCCCTTGGCGAGGCGAAGCACTACAACGCGACGAACCCCTTCGAC 1468 Query 47517 TTTATGAACAACATTTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAG 47564 || ||| | | || || ||| |||||||||||||| ||||||||| Sbjct 1469 TTCATGGAGATGATCTCCCTCCCTGGCAAGACCAACTTCTTCGAGAAG 1516 >seq753 Length=7390 Score = 125 bits (138), Expect = 7e-24 Identities = 133/174 (76%), Gaps = 6/174 (3%) Strand=Plus/Plus Query 146631 GACGGCGATAGAGGCCAAGTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAAT 146690 || |||||| ||||||||||| || || || |||||||||||| | |||| || ||| Sbjct 3384 GAGGGCGATGGAGGCCAAGTTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAAT 3443 Query 146691 CTCGGCGCAGAGGTTGCTGCACTTGATGATGCCCAAAtttttttGGTTACTAAACTT--- 146747 ||||| ||| |||||| |||||||||| |||||| |||||| |||| | |||| Sbjct 3444 CTCGGTGCACAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGT---TGGACTTTCG 3500 Query 146748 GTTGCAGGGGTCCTTGTAGAGCATGTACGGTCCCCCGGTTTCGACATTGGTCTC 146801 |||||| | ||||||||| |||||| | || | ||||| || || | || ||| Sbjct 3501 GTTGCAAGAGTCCTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTC 3554 >seq5385 Length=1056 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | ||| | || ||||| || || || ||||| ||| | Sbjct 898 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 839 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 838 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 779 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | |||| |||||| | |||||| Sbjct 778 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 719 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 |||| || | || || ||||| || || || || ||||| ||||| ||| Sbjct 718 TCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCATAGCT 668 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | ||| | || ||||| || || || ||||| ||| | Sbjct 213 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 154 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 153 AGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 94 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | |||| |||||| | |||||| Sbjct 93 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 34 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTT 127098 |||| || | || |||||||| || || || Sbjct 33 TCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq4492 Length=1347 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | ||| | || ||||| || || || ||||| ||| | Sbjct 131 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 190 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 191 AGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 250 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | |||| |||||| | |||||| Sbjct 251 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 310 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || |||||||| || || || || ||||| ||||| Sbjct 311 TCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCAT 357 >seq153 Length=16899 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | ||| | || ||||| || || || ||||| ||| | Sbjct 9644 CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 9585 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || || |||| | |||||||| || || || Sbjct 9584 AGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGG 9525 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || || ||| | | |||| |||||| | |||||| Sbjct 9524 ATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 9465 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGG 127115 |||| || | || |||||||| || || || || || || ||||||| Sbjct 9464 TCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCATGG 9416 >seq7439 Length=588 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 |||||||| | || | || | ||| | || ||||| || || || ||||| ||| | Sbjct 193 CCACCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 134 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| || || ||||| || || ||| |||| | |||||||| || || || Sbjct 133 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 74 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| ||| || ||| | | |||| |||||| | |||||| Sbjct 73 ATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACC 14 Query 127067 TCGACGG 127073 |||| || Sbjct 13 TCGAGGG 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475453529276720