Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq753 208 9e-49 seq3286 170 2e-37 seq44 82.4 9e-11 >seq753 Length=7390 Score = 208 bits (230), Expect = 9e-49 Identities = 637/974 (65%), Gaps = 17/974 (2%) Strand=Plus/Plus Query 115841 TGAGATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCA 115900 |||| |||| || |||| || || ||||| ||||| || || || || | | Sbjct 2795 TGAGGTCCTTGACAAGGTATTTGTTCACAACCGGGAACTCCCCACTCAGCGTACGGCGGA 2854 Query 115901 GATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGG 115960 || |||||||| ||| | ||||| ||||||||||||||||| | ||||| |||| Sbjct 2855 CGTAAATGTTGGTGGTGAAGGGCTCGAAGCACTCATTGTTACCGAGAATTTGACTGGTGG 2914 Query 115961 AGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTT 116020 |||| |||||||| || |||| | || ||| || | ||| | | | | ||| | Sbjct 2915 AGGCGGTGGGCATCGGCGCCACCAACAGAGAGTTTCGCATACCGGTCGTCTTGACGCGCT 2974 Query 116021 CCTTGAGGGCGTCCCAGTCGTAGTTG-AGCT--TTGTCTCCCCCTCCCACATATCAAACT 116077 |||| ||||||||||||| || | ||| | || | |||||| | ||| |||| Sbjct 2975 CCTTCAGGGCGTCCCAGTTCCAGCGGCCGCTCACCGGCTTCTTCTCCCAGAGATCGAACT 3034 Query 116078 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 116137 | || | |||||||| || || || ||| || ||||| || ||||| ||| ||| Sbjct 3035 GCAGAAGGCCTTGGGAGGCGGGGCTGCCGGGAAAGGTTTCATACGGTCCCTCCACCGCCG 3094 Query 116138 CCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 116194 |||| | ||||| | ||| | || |||| || || ||||| || ||| | | Sbjct 3095 CCAAGTCCACGGAG---GACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATGTCCTCGT 3151 Query 116195 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGA 116254 ||| || ||||| ||| || | ||| || | |||||| | ||||| | Sbjct 3152 TCAACCGCTGCGCCTCCTCGCTCGTGAAGGGGAGGCGAAGGAGAATAAAGGCGTCCGCCA 3211 Query 116255 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA 116314 || || || |||||||| | ||||| | || ||| ||| || || || |||| Sbjct 3212 ACCCCTGCACGCCGAGGCCGACCGGGCGGTTTCGCATGTTACTGCGTCTGGCCGTTTCCA 3271 Query 116315 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTT 116374 |||| || | || | || || || | || ||||| | ||| || |||| |||| | Sbjct 3272 CGGGGTAGTAGTTGCGGTCAATGACTCGGTTGAGATTGTAGGTCACGTCCTTGGTGACCT 3331 Query 116375 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 116434 | | ||||| | || ||||| || |||| | || | || ||||||| Sbjct 3332 CGTAGAGCTTCTGGTGGTCAAAGACGCCCTTCTCGGTGTCCACGAAGCGGGGGAGGGCGA 3391 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 | || |||| || ||||| | ||||| ||||| |||||||| ||||| || || | Sbjct 3392 TGGAGGCCAAGTTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAATCTCGGTGC 3451 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 ||| || || | ||| |||||||||| || || || || |||||| ||| || | | Sbjct 3452 ACAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGGTTGCAAGAGT 3511 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA 116614 ||||||| ||||| | || || |||||| ||||||| ||||| || ||| | Sbjct 3512 CCTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATGGCGAACCACA 3571 Query 116615 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 116674 || || | | ||| | || | | |||| |||||||| ||| Sbjct 3572 GCTCTTGCGCGGCGATGGTGCGGATGCCCAGACCCTGTCTCTCGTACTCCTCGTACTTCT 3631 Query 116675 CCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGC-CTTATCTGGACAGAAGA 116731 ||||||||| || || ||| | || || ||| ||||| ||| || | | Sbjct 3632 TCTCAAACTCCTCGCCGTGGCAGTCGCTCAG-GCC--GGTGCAGATATGGGGGTCCATCA 3688 Query 116732 GAGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCC 116790 | | ||| ||| || | || || || |||||||||||||| || ||||||||||| || Sbjct 3689 GCGTCCACTTGCCCTCGCT-CTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCG 3747 Query 116791 GAGAAGAGATCCCG 116804 |||||||||| || Sbjct 3748 TAGAAGAGATCACG 3761 >seq3286 Length=1922 Score = 170 bits (188), Expect = 2e-37 Identities = 357/527 (68%), Gaps = 10/527 (2%) Strand=Plus/Minus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| || ||| ||||||||||||||| ||||| ||| |||| ||| ||||||| Sbjct 1531 GTAGTCACCAACCTTCTTCTCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTCCAT 1472 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACCCCAATCTGTTTGAGGAGACG 127350 || || || |||||| | | ||| | | | | | |||| || ||||| Sbjct 1471 GAAGTCGAAGGGGTTCGTCGCGTTGTAGTGCTTCGCCTCGCCAAGGGAGACCAGCAGACG 1412 Query 127351 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 127410 |||| ||| |||||||||||| |||| |||| ||||||||||| || ||| Sbjct 1411 GTCCGCCACGAACTCAATGTACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCGCAC 1352 Query 127411 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCGTG 127470 ||||| | || |||||||| ||||||| |||||||| || || | |||| | Sbjct 1351 GGGGAGGGACTCGCAGATGAACTCCTTCTCGATGTCCACGGCATCGGTGATGATGTTCAG 1292 Query 127471 AATAGTGTCCACCCCAGGTCTATTGCGTAAAGTC----TTGAAGAGTTC-CACAGCAAAC 127525 | | | | | | | || | | | | || ||| | || ||| ||||| Sbjct 1291 CAC-GCGCTCGCGCGACAGCTTGTTCTTGATGTGGCTGTTGTACAGCAGGCAC-GCAAAG 1234 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| ||||||||||||||||| || || || || |||| ||| || ||||| Sbjct 1233 TCCGTGTGCAGACCCTCGTCACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGGCATC 1174 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 | || |||||||||| |||||| ||||| || || ||||| ||||||||||| |||||| Sbjct 1173 ACGCCGCGCTTCTTCAGCCAGAAGATCGCGCAGAAGGAGCCGGAGAAGAAGATGCCCTCC 1114 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAACCACTTC 127705 || ||| ||| | | || |||| | | ||| | || | | | ||| | Sbjct 1113 ACCGCCGCAAACCCGAGCAGGCGCT---CCTGGAAGCTCGCCTCGCTTCCGATCCAGCGC 1057 Query 127706 ATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGC 127752 | |||||||| ||||| |||| ||| || |||| ||||||||||| Sbjct 1056 ACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 1010 >seq44 Length=25566 Score = 82.4 bits (90), Expect = 9e-11 Identities = 168/247 (68%), Gaps = 6/247 (2%) Strand=Plus/Minus Query 175944 GACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGATATTGTTTGAGCCCATATAGT 176003 |||| | || |||||||| || | || || ||||| ||||| ||| || ||| Sbjct 2495 GACGGGAACCGAATTGACCCTCGGGGACCAGCAGGTTGATGTTGTTACCACCCGTAAAGT 2436 Query 176004 CATTCGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACCGTGATGGTAGGCCGACT 176063 | ||||| ||||| ||||| ||| ||||| | ||||||||| ||| |||| || Sbjct 2435 TCTGCGCCATTTTGACTATCGTTTCCTGCAGGGACATTTCACCGTGGTGGAAGGCGGAGA 2376 Query 176064 TGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATCTCATCCTTGAGGTTCTTGTGGA 176123 || | | ||| | | || ||||||||||| | | ||||| | ||||| | Sbjct 2375 CTTCGGAAATATAACCAGACAGTTGCGCCACCTTGGCCGCTTCCTTAATATTCTTCT-TC 2317 Query 176124 AGCA---CGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGTCGGCCATGTGTGCGA 176180 |||| | |||| | | ||||||||| ||||| || ||||||||| | ||| || | Sbjct 2316 AGCAATGCCCATAAA--ATCTTTCTCTGAGAAGGTTTTAGGCCGTCGACGGCGTGGGCAA 2259 Query 176181 TGGAACG 176187 ||| ||| Sbjct 2258 TGGCACG 2252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613446209715480