Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3286 170 3e-37 seq753 91.5 2e-13 >seq3286 Length=1922 Score = 170 bits (188), Expect = 3e-37 Identities = 292/421 (69%), Gaps = 2/421 (0%) Strand=Plus/Minus Query 159644 ACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAAT 159703 || ||||||||||| |||||||||||||| | ||| || |||||||| |||| Sbjct 1521 ACCTTCTTCTCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTCCATGAAGTCGAAG 1462 Query 159704 GGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACA 159763 |||||| || ||| ||| |||||| || || | |||||| | ||| ||||| Sbjct 1461 GGGTTCGTCGCGTTGTAGTGCTTCGCCTCGCCAAGGGAGACCAGCAGACGGTCCGCCACG 1402 Query 159764 AATTCGATGTAGCTACACATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCT 159823 || || ||||| | |||| ||| |||| || || | ||| | |||||||| | Sbjct 1401 AACTCAATGTACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCGCACGGGGAGGGAC 1342 Query 159824 TCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCG 159883 || | | ||||||||||| || || || || ||||| | || | | || || ||| Sbjct 1341 TCGCAGATGAACTCCTTCTCGATGTCCACGGCATCGGTGATGATGTTCAGCACGCGCTCG 1282 Query 159884 TACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGT 159943 | | ||||| | |||||| || |||| |||||||||||||| |||||| Sbjct 1281 CGCGACAGCTTGTTCTTGATGTGGCTGTTGTACAGCAGGCACGCAAAGTCCGTGTGCAGA 1222 Query 159944 CCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGT 160003 |||||||| || || || | ||||||| | | | ||||| ||||| | || ||| Sbjct 1221 CCCTCGTCACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGGCATCACGCCGCGCTTC 1162 Query 160004 TTGAGCCAAAAAATGGCCGCAAAAGCA-CCGCTAAAAAAGATCCCCTCCACGGCCGCAAA 160062 || ||||| || || | |||| ||| | ||| || ||||| |||||||| |||||||| Sbjct 1161 TTCAGCCAGAAGATCG-CGCAGAAGGAGCCGGAGAAGAAGATGCCCTCCACCGCCGCAAA 1103 Query 160063 C 160063 | Sbjct 1102 C 1102 >seq753 Length=7390 Score = 91.5 bits (100), Expect = 2e-13 Identities = 126/171 (74%), Gaps = 4/171 (2%) Strand=Plus/Plus Query 204841 GGCGGCCAGATTGCACACCGCGGGTCT-GTG-TGGCTCGCTCACCTCCACGATCTCGGTG 204898 || ||||| ||||||||||| | ||| || | ||| | || |||| ||||||||| Sbjct 3393 GGAGGCCAAGTTGCACACCGCCG-TCTCGTCCTTGCTGGTGTAC-TCCATAATCTCGGTG 3450 Query 204899 CACAAGTTACCGCACTTCACCACCCCCACATGCTGCTGGTTAGACTTGCGGTTACAGGAG 204958 |||| ||| |||||| | |||| || | |||||| ||||| ||||| || ||| Sbjct 3451 CACAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGGTTGCAAGAG 3510 Query 204959 TCCTTGTACATCATGAACGGCATTCCGTTCTCCATCTGAGATCGCAGAATG 205009 |||||||||| |||||| || | ||| |||||| ||| || ||||||| Sbjct 3511 TCCTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATG 3561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795076151633680