Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq153 125 8e-24 seq5385 122 1e-22 seq4492 122 1e-22 seq7439 105 8e-18 >seq153 Length=16899 Score = 125 bits (138), Expect = 8e-24 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || ||||||||||| ||||| || Sbjct 9609 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAA 9550 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| ||||| ||| | | Sbjct 9549 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTT 9490 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| || || || || | | |||||| ||||| || || || || || Sbjct 9489 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCAC 9430 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 9429 GAAGATTTGCAT 9418 >seq5385 Length=1056 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || ||||||||||| |||||||| Sbjct 863 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAA 804 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| ||||| ||| | | Sbjct 803 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTT 744 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| || || || || | | |||||| || || || || || || || Sbjct 743 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCAC 684 Query 46582 AAAGATTTGCAT 46593 || |||||||| Sbjct 683 GAAAATTTGCAT 672 Score = 113 bits (124), Expect = 5e-20 Identities = 131/177 (74%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || ||||||||||| |||||||| Sbjct 178 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAA 119 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| ||||| ||| | | Sbjct 118 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTT 59 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTT 46578 | | | |||||||| || || || || | | |||||| ||||| || || || || Sbjct 58 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq4492 Length=1347 Score = 122 bits (134), Expect = 1e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || || |||||||| |||||||| Sbjct 166 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCCAGCTGCTTACCGGCGAA 225 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| ||||| ||| | | Sbjct 226 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTCACGTT 285 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||||| || || || || | | |||||| ||||| || || || || || Sbjct 286 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTTCAC 345 Query 46582 AAAGATTTGCATTTT 46596 || |||||||| || Sbjct 346 GAAAATTTGCATATT 360 >seq7439 Length=588 Score = 105 bits (116), Expect = 8e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||||| || ||||| | || ||||||||||| |||||||| Sbjct 158 CTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAA 99 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||||| | || | || |||||||||| |||||| ||| | | Sbjct 98 GATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTT 39 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559 | | | |||||||| || || || || | | ||||| Sbjct 38 CTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565182208237560