Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3286 273 2e-68 seq4492 147 2e-30 seq5385 134 1e-26 seq153 131 2e-25 seq7439 109 5e-19 seq799 86.0 6e-12 >seq3286 Length=1922 Score = 273 bits (302), Expect = 2e-68 Identities = 619/916 (68%), Gaps = 26/916 (3%) Strand=Plus/Minus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 |||||| || || || || || || ||||| ||||| || || || || || || Sbjct 1549 CATCACACCGGCCTTCTGGTAGTCACCAACCTTCTTCTCGAAGAAGTTGGTCTTGCCAGG 1490 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 | ||| || | | ||| || || |||||||| | | |||||||||||| | || Sbjct 1489 GAGGGAGATCATCTCCATGAAGTCGAAGGGGTTCGTCGCGTTGTAGTGCTTCGCCTCGCC 1430 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| ||| ||||| | ||| ||||||||||| ||||| || ||| | || | || Sbjct 1429 AAGGGAGACCAGCAGACGGTCCGCCACGAACTCAATGTACTGGCTCATCATCTCCGAGTT 1370 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCG 132829 | || | ||| ||||| || || | ||| || ||| | || ||||||| | || | Sbjct 1369 CATACCAATCAGGCGCACGGGGAGGGACTCGCAGATGAACTCCTT-CTCGATGTCCACGG 1311 Query 132830 CGTCGGTGACGATTTCCCTAACGCGCGC-CGCGCTCGGCCGTTGCACCAAATG-----CT 132883 | ||||||| ||| | | |||||| | |||| | || ||| | ||| | Sbjct 1310 CATCGGTGATGATGTTCAGCACGCGCTCGCGCG-ACAGC--TTGTTCTTGATGTGGCTGT 1254 Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 || ||| || ||| |||||||| |||| |||||||| | |||||| || ||||||| Sbjct 1253 TGTACAGCAGGCACGCAAAGTCCGTGTGCAGACCCTCGTCACGGGAAATCAGCTCGTTGC 1194 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 |||| |||| ||||||||| | |||||| || || ||||| || || ||| ||| || Sbjct 1193 TGAAGGTCAGGCCGGGCATCACGCCGCGCTTCTTCAGCCAGAAGATCGCGCAGAAGGAGC 1134 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||||| |||||| || ||||| || | | ||||||||| ||| | || | Sbjct 1133 CGGAGAAGAAGATGCCCTCCACCGCCGCAAACCCGAGCAGGCGCTCCTGGAAGCTCGCCT 1074 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | ||| |||||||||||| |||||| || ||||| | | || |||||| ||||| | Sbjct 1073 C---GCTTCCGATCCAGCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCT 1017 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACG-CACGTAGGTGTCGATGAGG 133182 ||| |||| || || || ||||| | || | || | ||| ||||| | || Sbjct 1016 GGATCGCGTGCAGCAGCTTCAGCTTCTCCT-CGCTGTCCGTGATGTACGTGTCCAGCAGC 958 Query 133183 GTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTA-AAAGCACCG 133241 || || | || ||||| | ||||||||| | || |||||||| || ||| || Sbjct 957 ACAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATCAGCTGGAAGCCGTAGAACGCA-CG 899 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 ||||| ||||| || || ||| |||| | || || || | |||||||| Sbjct 898 GGCCTCCGGCACCTTGACGTCCGACATGAAGCGCTGCGCGAGGTTCTCAATCACGATGCC 839 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 ||||||| | ||||| ||||| ||||||| ||||||||| || ||||| || ||| Sbjct 838 GTCGCTGCCAGCGAAGAAGGCAAGCACGTACTTGATGAAGTGCTGCTCGCCCTCCGTCAT 779 Query 133362 GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGC 133421 || |||||| | ||| || ||| || | |||||| | ||||| || || Sbjct 778 CTTCTTCCAGTCCGTCAGGTCATTTCCCAGATCGATCTCCTCCAGCGTCCA----GATGC 723 Query 133422 --CTCGGCT--TTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAA 133477 ||| || | |||||| | |||| ||||| || || || || || | ||| | Sbjct 722 AGCTCTCCTGCTCCTTGTACTTCTTCCAGATGTCGTGGTACTGGATCGGGAACAGCACGA 663 Query 133478 ACCGGCGGGGGTTTTC 133493 | ||| |||||| || Sbjct 662 AGCGGTAGGGGTTGTC 647 >seq4492 Length=1347 Score = 147 bits (162), Expect = 2e-30 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| |||||||| ||||| || || ||||| ||||| |||||| || |||| |||||| | Sbjct 361 AAATATGCAAATTTTCGTGAAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTC 302 Query 38300 CACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || ||||| | | | |||| | || | || || | ||||| ||||| || ||| | | Sbjct 301 CAGCGACACCATCGAGAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGG 243 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||||| ||||| | ||| || || |||||||| || | ||||||||| ||||| Sbjct 242 ACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTGGAAGAGGGCCGCACCCTCGCCGACT 183 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||||||| ||||| | || || ||| | || || || Sbjct 182 ACAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCG 143 >seq5385 Length=1056 Score = 134 bits (148), Expect = 1e-26 Identities = 161/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || ||||| || || |||||| || |||| |||||| ||| | Sbjct 672 ATGCAAATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGTCCAGC 731 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| ||||| || ||| | ||||| Sbjct 732 GACACCATCGAGAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCA 790 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| || || ||||| || || | ||||||||| ||||||||| Sbjct 791 GCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAAGAAGGTCGCACCCTCGCCGACTACAA 850 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || || ||| | || || || Sbjct 851 CATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCG 886 Score = 122 bits (134), Expect = 9e-23 Identities = 149/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 38259 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AAC 38317 || || ||||| ||||| |||||| || |||| |||||| ||| ||||| | | | ||| Sbjct 2 AAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGCGACACCATCGAGAAC 61 Query 38318 GCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTA 38377 | | || | || || | ||||| ||||| || ||| | ||||| ||||| ||||| | Sbjct 62 G-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTT 120 Query 38378 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGC 38437 ||| || || ||||| || || | ||||||||| ||||||||||||||| ||||| | Sbjct 121 CGCCGGTAAGCAGCTCGAAGAAGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTC 180 Query 38438 GACGCTGCATTTGGTGCTGCG 38458 || || ||| | || || || Sbjct 181 CACCCTCCATCTCGTCCTCCG 201 >seq153 Length=16899 Score = 131 bits (144), Expect = 2e-25 Identities = 160/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||| || |||| |||||| ||| | Sbjct 9418 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGC 9477 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| ||||| || ||| | ||||| Sbjct 9478 GACACCATCGAGAACG-TGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCA 9536 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || || || ||||| || || | ||||||||| ||||||||| Sbjct 9537 GCAGCGCCTCATCTTTGCCGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCCGACTACAA 9596 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||| | || || ||| | || || || Sbjct 9597 CATCCAGAAGGAGTCCACCCTTCATCTCGTCCTCCG 9632 >seq7439 Length=588 Score = 109 bits (120), Expect = 5e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 38278 CCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTC 38336 ||||| || |||| |||||| ||| ||||| | | | |||| | || | || |||| Sbjct 1 CCATCGCCCTCGAGGTCGAGTCCAGCGACACCATCGAGAACG-TGAAGGCTAAGATCCAG 59 Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| || ||| | ||||| ||||| ||||| | ||| || || ||||| || Sbjct 60 GACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAA 119 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | ||||||||| ||||||||||||||| ||||| | || || ||| | || || Sbjct 120 GAAGGTCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTC 179 Query 38457 CG 38458 || Sbjct 180 CG 181 >seq799 Length=7053 Score = 86.0 bits (94), Expect = 6e-12 Identities = 93/122 (76%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396 ||||| ||||| |||||| | ||||| ||||| || || | ||| || || ||||| || Sbjct 16 GACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAGCAGCTCGAG 75 Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456 || | || |||||| |||||||||||||| ||||| | || || || |||||||| Sbjct 76 GAGGGCCG-ACCCTCGCGGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTGCTC 134 Query 38457 CG 38458 || Sbjct 135 CG 136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500123076571520