Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq699 311 1e-79 seq186 237 2e-57 seq2946 150 2e-31 >seq699 Length=7719 Score = 311 bits (344), Expect = 1e-79 Identities = 632/932 (68%), Gaps = 25/932 (3%) Strand=Plus/Minus Query 7225 ACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATC 7284 |||||| | ||| || || || || ||||| |||||||| |||| | | ||| || Sbjct 6409 ACGGAAGAGGTCGCCGCAGAGCTCTTCGAAACGGGCACGGGTGATGGTGGACTGGAAGTC 6350 Query 7285 AACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCG 7344 | | ||| | | | || || || ||||| | || | | || || | || || Sbjct 6349 GATGTTATCGAAGAGGGCGTCTATCTCGATGGTGGCCTGGGTGGCGGAGGACAGGGTGCG 6290 Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 ||| |||||||| || || || || | ||| || || || || |||| ||| | || Sbjct 6289 CTTGGCGCGCTCGCAGGCAGTGCGGAGACGGCGGAGAGCGCGGTGGTTGCCGCTGAGGTC 6230 Query 7405 TTT---CTTATGTTTACGTTTAAACTCTTCAGAGAAG----TGTCGAAGGAGTCTCGAAT 7457 || ||| | || || || ||||| |||| |||| || | |||| | | || Sbjct 6229 CTTACCCTTGTTCTTGCGCTTGAACTCCTCAGTGAAGAAGGTGAC-AAGGCGGTT---AT 6174 Query 7458 CGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTC 7517 |||| || || || || | ||| ||||| || || || || || ||||| |||||||| | Sbjct 6173 CGAAGTCCTCGCCGCCGAGGTGGGTATCGCCGGCAGTGGCCTTCACTTCGAAGATACCAC 6114 Query 7518 CTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT 7577 | || ||| | | | | ||||| |||||||| ||||| || || || ||||| |||| Sbjct 6113 CGTCGATGGTGAGAAGGGTGACATCGAACGTACCGCCACCGAGATCGAAGATGAGGACGT 6054 Query 7578 T------CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTG 7631 | | || ||||||| | ||| ||||||||||| |||||||| || || || | Sbjct 6053 TGCGCTCCTTACCGTCGTC---GCCCTTGTCGAGACCGTAGGCGATAGCGGCGGCAGTGG 5997 Query 7632 GTTCATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690 | || ||||| || || || || || || || || || | | || || || || || Sbjct 5996 GCTCGTTAATGATGCGGAG-CACCTCGAGACCGGCGATCATACCGGCGTCCTTGGTGGCC 5938 Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750 || || || || ||||| |||||||| ||||| || | ||| || | | | || | |||| Sbjct 5937 TGGCGCTGAGAGTCGTTGAAGTAGGCGGGGACGGTAATGACGGCCTTCTTCACCTGCTTA 5878 Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCA 7810 ||||| || | || ||| | || ||||| ||| | || ||||| || ||||| || Sbjct 5877 CCGAGGTAGGCCTCGGCGGTCTCCTTCATCTTGATGAGCACCATGGAGCTGATCTCCTCG 5818 Query 7811 GCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCA 7870 | | || ||| ||||||| || | || | || | ||| || || | | Sbjct 5817 GGGGTGAAGGTCTTCTCCTCACCGTGGAACTGCACCTGAACGACGGGCTTGTCGTCTCCC 5758 Query 7871 CCGGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAAC 7930 || || ||||| | | ||| | ||||| ||| || || | |||| | | Sbjct 5757 TTGGAGACCACCTTGAAGGGCCAGTGCTTCATGTCGCTCTGCACTTCGGAGTCCTTGAGC 5698 Query 7931 TTTCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGG 7990 || | ||||| || ||||| |||||||| || ||||| | |||||||||||| |||| Sbjct 5697 TTGCGGCCGATCAGGCGCTTCGCATCAAAGACGGTGTTGTGGGGGTTCATGGCGACTTGG 5638 Query 7991 TTCTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGG 8050 ||||| || || || ||||| ||||| || || || ||||||||||| || ||| Sbjct 5637 TTCTTGGCGGCATCTCCGATCAGACGCTC---GGAGTCGGTGAACGCGACGTAGGAGGGG 5581 Query 8051 GTCGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCG 8110 ||||| || || ||||| ||||| ||||| || || || || ||||| ||||| ||||| Sbjct 5580 GTCGTGCGGTTACCTTGATCGTTAGCAATGATCTCCACACGTTCGTTCTGCCAAACGCCC 5521 Query 8111 ACGCACGAATACGTTGTTCCTAAATCAATACC 8142 || || || || || || || ||||||||||| Sbjct 5520 ACACAAGAGTAGGTCGTACCCAAATCAATACC 5489 >seq186 Length=15591 Score = 237 bits (262), Expect = 2e-57 Identities = 470/691 (68%), Gaps = 10/691 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || |||||||| | || ||||| || ||||| || ||||| |||||| || Sbjct 3875 ATCAAAGTCCTCACCACCGAGATGGGTATCACCAGCGGTGGCCTTGACGGTAAAGATGCC 3934 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | |||||| | | | | ||||| |||||||| || || || || |||||||| || Sbjct 3935 GTCGTCAATGGTCAGAAGGGTCACATCGAACGTACCGCCGCCGAGATCGAAAATGAGCAC 3994 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| | ||| ||| | ||||| |||| |||||| || ||||| ||||| || || || Sbjct 3995 ATTCTTCTCGCCGTTGGTCTTCTTGTCGATACCGTAGGCAATAGCGGCCGCGGTGGGCTC 4054 Query 7636 ATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||||| ||||| || || || | ||| ||||| || | || || || || || || | Sbjct 4055 GTTAATGATACGGAG-CACCTCTAAGCCGGCAATTGTACCGGCGTCCTTGGTGGCCTGAC 4113 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || || ||||| |||||||| ||||| || | ||| || | ||||| || ||| Sbjct 4114 GCTGAGAGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCCTTGGTGACCGACTCGCCGC 4173 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 || | |||||| | || ||||| ||| || ||||| | || || || || | | Sbjct 4174 AGTAGGCTTCCGCCACCTCCTTCATCTTGCCGAGCACCATGGCAGAGATTTCCTCGGGGG 4233 Query 7815 CAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAG-CACCG 7873 || ||| || || | | || || | | || || ||| || | ||||| Sbjct 4234 AGAAGGACTTCTGGTCGCCCTGGTAGTCCACCACCACCACCGGCTTACCCTCCTTCACCG 4293 Query 7874 GGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTT 7933 | ||||| | | ||| | ||||| ||| || | | |||| ||||| Sbjct 4294 ----TCACCTTGAAGGGCCAGTGCTTCATGTCGGACTGCAAGTCGGGGTCATCGAACTTG 4349 Query 7934 CTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTC 7993 | || || | ||||| |||||||| | ||||| |||||||||||| || ||| Sbjct 4350 CGGCCAATCATGCGCTTGGCATCAAAGATGGTGTTGAGGGGGTTCATGGCCACCTGATTC 4409 Query 7994 TTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTC 8053 || || || || |||| ||||| || | | | || || |||||||| || ||||| Sbjct 4410 TTGGCGGCATCACCGACCAGACGCTCCGTCT---CGGTGAAGGCGACGTAGGAGGGGGTG 4466 Query 8054 GTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACG 8113 || || || || |||||||| || ||||| || || |||| || | ||||||||||| Sbjct 4467 GTACGGTTACCCTGGTCGTTGGCGATAATCTCCACCTGGTCATTCTTGAAGACGCCGACG 4526 Query 8114 CACGAATACGTTGTTCCTAAATCAATACCGA 8144 || || || || || || ||||||||||||| Sbjct 4527 CAGGAGTAGGTCGTGCCCAAATCAATACCGA 4557 >seq2946 Length=2152 Score = 150 bits (166), Expect = 2e-31 Identities = 241/342 (70%), Gaps = 12/342 (4%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| || || |||||||| | || ||||| || ||| || |||||||||| ||| Sbjct 931 ATCAAAGTCCTCACCACCGAGATGGGTATCACCGTTGGTGGCCACCACTTCAAAGAAACC 990 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | | |||||| | | | || |||||||||||||||||||| || || || | ||| | Sbjct 991 TTCGTCAATGGTGAGAAGAGACACATCAAACGTACCACCACCGAGATCGAAGACGAGAAT 1050 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 |||| | ||| | | |||||| |||||||| |||||||| || || || || || Sbjct 1051 GTTCTTCTCGCCCGCCTTGTTC------AGACCGTAGGCGATAGCGGCGGCAGTGGGCTC 1104 Query 7636 ATTAATAATACGAA-GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||||||||||||| ||| || ||||| ||||| || | | || || || | || | Sbjct 1105 GTTAATAATACGAACCACA-TTGAGGCCGGCAATCGTACCAGAGTCCTTGGTGGACTGAC 1163 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 | || | |||||| ||||| || || || || || || |||| | | || |||| || | Sbjct 1164 GCTGGGCATCGTTGAAGTACGCGGGCACAGTGACCACGGCGTTCTTCACCTTCTCGCCAA 1223 Query 7755 GATACGATTCCGCGATATCTTTCA--TTTTGGTAAGAACCAT 7794 || | || ||||| | |||| |||||| || ||||| Sbjct 1224 TGTAGGTCTCAGCGATCTGCTTCATCTTTTGG--AGCACCAT 1263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635069659860520