Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq753 226 4e-54 seq3286 114 2e-20 seq3134 82.4 9e-11 seq1411 82.4 9e-11 >seq753 Length=7390 Score = 226 bits (250), Expect = 4e-54 Identities = 840/1298 (65%), Gaps = 24/1298 (2%) Strand=Plus/Minus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| |||||| || || |||||||||||||| ||||| || | || || ||| | Sbjct 4145 TTCACCCACGCCACCCCCACCCTCTTCAACGCCGGTACCCCCAACCCTCAGATGAGTTCT 4086 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 || ||| | |||| | ||||| || ||| | ||||| |||| || || | ||| Sbjct 4085 TGCTTCTTGGTTGCCATGAAGGACGACAGTATCGAGGGCATCTACGATACGCTGAAGGAA 4026 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 || ||| ||| |||| || ||||| ||||| | ||| | || | | | || Sbjct 4025 TGCGCCATCATCAGCAAGTCTGCCGGTGGCATCGGTTTCCACGTGCACAACATTCGTTCC 3966 Query 111885 AAC--AAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTC 111942 | |||| | ||| ||||| || || || | ||| | | || ||||||| Sbjct 3965 GCCGGAAGTTAC--ATTGCGGGTACCAACGGGACGTCGAACGGTTTAGTGCCGATGCTTC 3908 Query 111943 GCGTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTC---GCAAGGGATCTA 111999 |||| | || || || || || || |||| | || || | ||||| | Sbjct 3907 GCGTGTGGAATAATACCGCCCGTTACGTCGACCAGGGCGGCGGTAAGAGAAAGGGTGCCT 3848 Query 112000 TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCA 112059 | || ||||| || ||||| |||||||| || || | ||||||||| || | | Sbjct 3847 TTGCCGTCTACCTCGAGCCCTGGCACGCCGACATTTTTGAGTTCCTTCTCCTGAAGCGTA 3788 Query 112060 ACCAAGGTGATGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATC 112119 || ||| | ||||| || ||| |||||||||| ||| |||||||| || |||| Sbjct 3787 ACACCGGTAAGGAGGACAACCGTGCCCGTGATCTCTTCTACGCCCTCTGGATCCCCGATC 3728 Query 112120 TCTTCATGAAGAGAGTTGAG-GAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAG-GC 112177 ||||||||||| | || || | ||| ||||| ||| | || | || | | || Sbjct 3727 TCTTCATGAAGCGTGTCAAGAGCGAG-GGCAAGTGGACGCTGATGGACCCCCATATCTGC 3669 Query 112178 ACCCGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 ||| || || ||| |||| || ||||||||||| ||| |||||||| Sbjct 3668 ACC-GGCCTGAGCGACTGCCACGGC-GAGGAGTTTGAGAAGAAGTACGAGGAGTACGAGA 3611 Query 112237 AAGAAAGTC-GGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAG 112295 | | ||| |||| | || | ||| || || ||||| || ||||| || Sbjct 3610 GACAGGGTCTGGGCATCCGCACCATCGCC-GCGCAAGAGCTGTGGTTCGCCATTCTGGAG 3552 Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 || || ||||| ||| || | ||||| ||||| ||| | || |||| |||| Sbjct 3551 TCCCAGGTGGAGACCGGTGTCCCTTTCATGCTGTACAAGGACTCTTGCAACCGAAAGTCC 3492 Query 112356 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTT 112415 || || || ||| |||| |||||| | |||||||| || || || || |||| | Sbjct 3491 AACCAGAAAAATCTGGGCACCATCAAGTGCTCCAACCTGTGCACCGAGATTATGGAGTAC 3432 Query 112416 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 112475 || ||| || |||||||| ||||| ||| | || || ||||| |||||| | ||| Sbjct 3431 ACCAGCAAGGACGAGACGGCGGTGTGCAACTTGGCCTCCATCGCCCTCCCCCGCTTCGTG 3372 Query 112476 GATCCAGAGACAAAGACAT--TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCA 112533 || | |||| | | | | |||| | | || ||| |||| || || || || | Sbjct 3371 GACACCGAGA--AGGGCGTCTTTGACCACCAGAAGCTCTACGAGGTCACCAAGGACGTGA 3314 Query 112534 CAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 112593 | | || || ||| |||| ||||| | || | |||||||| || || || | Sbjct 3313 CCTACAATCTCAACCGAGTCATTGACCGCAACTACTACCCCGTGGAAACGGCCAGACGCA 3254 Query 112594 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATTC 112653 ||| ||| || |||| || | || ||||| || || || | ||||| | || |||| Sbjct 3253 GTAACATGCGAAACCGCCCGGTCGGCCTCGGCGTGCAGGGGTTGGCGGACGCCTTTATTC 3194 Query 112654 TTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGA 112713 | ||||| | | || ||| || ||| || | || | | || || |||| Sbjct 3193 TCCTTCGCCTCCCCTTCACGAGCGAGGAGGCGCAGCGGTTGAACGAGGACATCTTCGAGA 3134 Query 112714 CAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATG 112773 | || || ||||||| | ||| | ||| ||||| | ||| || || || |||| Sbjct 3133 CCATCTACTACGCCGCGGTGGAGTCCTCCGTGGACTTGGCGGCGGTGGAGGGACCGTATG 3074 Query 112774 AAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTG 112833 |||||||| || || || || ||||| | || || || ||| | |||| || | Sbjct 3073 AAACCTTTCCCGGCAGCCCCGCCTCCCAAGGCCTTCTGCAGTTCGATCTCTGGG-AGAAG 3015 Query 112834 AGACC---AAGC-TTCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGT 112889 | || ||| | || |||||||||| || ||||| ||| ||||| || ||| Sbjct 3014 AAGCCGGTGAGCGGCCGCTGGAACTGGGACGCCCTGAAGGAGCGCGTCAAGACGACCGGT 2955 Query 112890 CTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGT 112949 | || ||| ||| ||| |||| || ||||| || ||||||||| ||||| | ||| Sbjct 2954 ATGCGAAACTCTCTGTTGGTGGCGCCGATGCCCACCGCCTCCACCAGTCAAATTCTCGGT 2895 Query 112950 AATAATGAATGCTTTGAACCCTACACGACGAACATCTA 112987 || ||||| ||||| || |||| ||| || ||||| || Sbjct 2894 AACAATGAGTGCTTCGAGCCCTTCACCACCAACATTTA 2857 >seq3286 Length=1922 Score = 114 bits (126), Expect = 2e-20 Identities = 193/279 (69%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 102054 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTT 102113 |||| ||| || | ||| | | |||||| | |||| | | || ||||| || | Sbjct 965 GACACGTACATCACGGACAGCGAGGAGAAGCTGAAGCTGCTGCACGCGATCCAGACGATC 1024 Query 102114 CCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 102173 || || || || ||||| ||||| ||||| || ||| | | | || || | | Sbjct 1025 CCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGCTGGATCGGAAGCGAGGCGAG---C 1081 Query 102174 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 102233 || ||||| || ||| |||||| || ||||| ||||||||||| || |||||| Sbjct 1082 TTCCAGGAGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 1141 Query 102234 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 102293 ||||| || | ||||| |||||||| || | ||||| || || |||| ||||||| Sbjct 1142 TGCGCGATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCCGGCCTGACCTTCAGCAACGAG 1201 Query 102294 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 || || || ||||||||||| || ||| || |||||| Sbjct 1202 CTGATTTCCCGTGACGAGGGTCTGCACACGGACTTTGCG 1240 >seq3134 Length=2018 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 176702 GGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCG 176761 ||||||||| |||| | ||| |||| ||||| || ||||||||||| ||||||| ||| Sbjct 1768 GGCCAGAAGAAGTGCACCATGTTGATGATGAGGCCTTTGATGTGGGAGCCGTCGTGATCC 1709 Query 176762 GCATCCGTCATGATCATGAGACGACCATACCGAAG 176796 ||| | |||||||||||| | || || ||||| Sbjct 1708 TGATCGGACATGATCATGAGGTGGCCGTATCGAAG 1674 >seq1411 Length=4569 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 176702 GGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCG 176761 ||||||||| |||| | ||| |||| ||||| || ||||||||||| ||||||| ||| Sbjct 3790 GGCCAGAAGAAGTGCACCATGTTGATGATGAGGCCTTTGATGTGGGAGCCGTCGTGATCC 3731 Query 176762 GCATCCGTCATGATCATGAGACGACCATACCGAAG 176796 ||| | |||||||||||| | || || ||||| Sbjct 3730 TGATCGGACATGATCATGAGGTGGCCGTATCGAAG 3696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620680690446160