Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3286 147 3e-30 seq3868 86.0 7e-12 seq1774 86.0 7e-12 >seq3286 Length=1922 Score = 147 bits (162), Expect = 3e-30 Identities = 309/450 (69%), Gaps = 17/450 (4%) Strand=Plus/Minus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| ||||| |||||| |||||||||||||| ||| ||| || | ||||| Sbjct 1530 TAGTCACCAACCTTCTTCTCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTCCATG 1471 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAATGGGTGGCACC-CCAACTTGTTTGAGGAGACG 117104 ||||| || || ||| ||||||| | || | || | |||| || ||||| Sbjct 1470 AAGTCGAAGGGGTTCGTCGCGTTGTAG-TGCTTCGCCTCGCCAAGGGAGACCAGCAGACG 1412 Query 117105 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACA 117164 |||| ||| |||||||||||| | |||| |||| ||||||||||| || || Sbjct 1411 GTCCGCCACGAACTCAATGTACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCGCAC 1352 Query 117165 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG----G 117220 ||||| | || |||||||| | ||||| || || || || || | | |||| | Sbjct 1351 GGGGAGGGACTCGCAGATGAACTCCTTCTCGATGTCCACGGCATCGGTGATGATGTTCAG 1292 Query 117221 CGTG-GATAGTTTCGGTAG-TGGGTCT--ATTACGCAAAGTCTTGAAGAGCTC-CACGGC 117275 | | | | | || || | | ||| || || | ||| | ||| |||| | Sbjct 1291 CACGCGCTCGCG-CGACAGCTTGTTCTTGATGTGGC----TGTTGTACAGCAGGCACG-C 1238 Query 117276 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGG 117335 ||| ||| ||| |||||||| || |||||||| || || || |||| ||||| || Sbjct 1237 AAAGTCCGTGTGCAGACCCTCGTCACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGG 1178 Query 117336 CATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACC 117395 ||| | || |||||||||| ||| | || |||||||| || |||||||||||||| || Sbjct 1177 CATCACGCCGCGCTTCTTCAGCCAGAAGATCGCGCAGAAGGAGCCGGAGAAGAAGATGCC 1118 Query 117396 CTCCACACACGCAAACGCAAAAAGGCGCTC 117425 |||||| ||||||| | | |||||||| Sbjct 1117 CTCCACCGCCGCAAACCCGAGCAGGCGCTC 1088 >seq3868 Length=1597 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 136164 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 136223 |||| |||||||||| ||| ||||||| ||| | ||| ||| ||||||||||||| |||| Sbjct 1340 GCTCCTATAGTGTAGCGGTTATCACTTCGGATTCTGATTCCGACAACCCTGGTTCGAATC 1281 Query 136224 CAGGTAGGAG 136233 |||||||||| Sbjct 1280 CAGGTAGGAG 1271 >seq1774 Length=3611 Score = 86.0 bits (94), Expect = 7e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 136164 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 136223 |||| |||||||||| ||| ||||||| ||| | ||| ||| ||||||||||||| |||| Sbjct 3488 GCTCCTATAGTGTAGCGGTTATCACTTCGGATTCTGATTCCGACAACCCTGGTTCGAATC 3547 Query 136224 CAGGTAGGAG 136233 |||||||||| Sbjct 3548 CAGGTAGGAG 3557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589922148533720