Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq5385 132 1e-25 seq4492 127 5e-24 seq153 127 5e-24 seq7439 120 7e-22 seq799 105 1e-17 >seq5385 Length=1056 Score = 132 bits (146), Expect = 1e-25 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| ||||| || || | || |||||| Sbjct 880 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCG 821 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || ||||| || ||||| ||| Sbjct 820 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 761 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||| |||||||| ||||||| | | || || || || |||| | |||| Sbjct 760 ATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGAC--TCGACCTCGAGGGCGATGGTCT 703 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | || || ||||| | |||||| Sbjct 702 TACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 125 bits (138), Expect = 2e-23 Identities = 117/149 (79%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| ||||| || || | || |||||| Sbjct 195 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCG 136 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || ||||| || ||||| ||| Sbjct 135 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 76 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||| |||||||| |||||||| Sbjct 75 ATCTTAGCCTTCACGTTCTCGATGGTGTC 47 >seq4492 Length=1347 Score = 127 bits (140), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| ||||| || || | || ||||| Sbjct 149 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCC 208 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || ||||| || ||||| ||| Sbjct 209 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 268 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||| |||||||| ||||||| | | || || || || |||| | |||| Sbjct 269 ATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGAC--TCGACCTCGAGGGCGATGGTCT 326 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | || || ||||| | |||||| Sbjct 327 TGCCGGTGAGGGTCTTCACGAAAATTTGCAT 357 >seq153 Length=16899 Score = 127 bits (140), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| |||||||| || || || ||||| ||||| || || | || || ||| Sbjct 9626 ACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCG 9567 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| || ||||| || || || ||||| || || ||||| || ||||| ||| Sbjct 9566 AGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 9507 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||| |||||||| ||||||| | | || || || || |||| | |||| Sbjct 9506 ATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGAC--TCGACCTCGAGGGCGATGGTCT 9449 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || || | || || ||||| | |||||| Sbjct 9448 TGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq7439 Length=588 Score = 120 bits (132), Expect = 7e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || || |||||||| || || || ||||| ||||| || || | || |||||| Sbjct 175 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCG 116 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 ||||||||||| |||||||| || || || ||||| || || ||||| || ||||| || Sbjct 115 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 56 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC 195080 || || ||| |||||||| |||||||| Sbjct 55 ATCTTAGCCTTCACGTTCTCGATGGTGTC 27 >seq799 Length=7053 Score = 105 bits (116), Expect = 1e-17 Identities = 96/120 (80%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || ||||| || || || || ||| || |||||||| Sbjct 125 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTCGGCCC-TCCTCGAGCTG 67 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 |||||| |||||||| || || || ||||| || |||||||| || ||||| ||||| || Sbjct 66 CTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109368546251951