Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq779 156 6e-33 >seq779 Length=7186 Score = 156 bits (172), Expect = 6e-33 Identities = 538/822 (65%), Gaps = 34/822 (4%) Strand=Plus/Minus Query 136648 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 136707 ||||| ||||| | ||| || || ||| || ||| | ||||| ||||| | ||||| Sbjct 1475 CCCTTGACGCACAAGACCTGATTAAGGATGGCGACCACCTCCACAAGGTCACTTTGGGCG 1416 Query 136708 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 136767 | |||||| | || |||| |||||| ||| |||| | || || | || || ||||| Sbjct 1415 TTCATGACAGTATCAATGTTCTTGTACGCCCTCGGTGTCTCATCCAGGACCCCCTCGTCC 1356 Query 136768 TTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAG-GTCGCCTT 136826 || | |||| ||| || | ||| | | || || || || ||||| ||||| || Sbjct 1355 TTCCTGCACGTCACCCCGGCCGTGTCTTGGACATGATCACTGAGAGTGAACCGTCGC-TT 1297 Query 136827 GGCCTGGGTCC-GCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCG 136885 |||| | || || | | | ||||||||||||| ||||| |||||| | || Sbjct 1296 CGCCTCGCCCCTGCTGTACAGGC-GGCCCGCGCCGTGAGAGCAGGAGCAGTAGCTCTCGT 1238 Query 136886 CATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGA 136945 ||||||||||| || || || ||| | |||||||||||||| || |||| | | | Sbjct 1237 GGTTGCCCTTGCCCCGGACAATATAGCTCCGCGCCCCCATCGAGCCAGGAATGACCGCCA 1178 Query 136946 ACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCA---CGAAGACCCACTCGTC-G 137001 || | | || ||||| || || |||||||||| | |||| ||||| | Sbjct 1177 GCTCCCCTTCCTTGGCCGAGGTGGCCCCTTTGCGGGTCAGCCACACCACCCTGTCGTCTG 1118 Query 137002 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGC---TTCCTTGTCC--- 137055 | || | || || || ||||| |||||||||||||| | ||||| Sbjct 1117 CCACCGCATGGC-GCTCCACATAATTGTGATGGCAGTTCACCGCCGTGGCGCTGTCCACG 1059 Query 137056 --GTCTTGAACGGCGGCAGGC-CCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATC 137112 | | | | || || ||| ||| || || ||||| | ||| ||||||| Sbjct 1058 GTGAGTGGGATGGAGGACGGCAGTGACCGGCGGATCGCCTCGATCGTCCGCTCCATCATG 999 Query 137113 ATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGG 137172 | |||||| | | ||| ||| ||| |||| | || || ||||| || || | Sbjct 998 AGACGGCGGTTCCACAGGGCGTAGTTCTGCGCCCACTCCACCGCCTCCACATACTCCCTG 939 Query 137173 AA--CTCCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGT 137230 || | | | || ||| | | || | || ||||||| || | | || || | | Sbjct 938 AAGTGTACTG-TCCCCTCCTC-CAGGTAGGCCAGGTCCTGGTGCGGGAGCGTGTG--CAG 883 Query 137231 CACGACGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGA 137290 ||| | | ||| || |||||| |||| ||| || ||| ||||||| |||||||| Sbjct 882 CAC-ATTCCCCATGTCCTTCTTGGCGGTCTCAATGTAGGTGCTGCCGATGCGGTTGCCGA 824 Query 137291 CGCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCG---CTGGTCCTCG------TCGA 137341 || || ||||| ||||| ||||||||||| ||| | ||||| |||| || | Sbjct 823 TCCCCCGAGAGCCAGAGTGCAGCATCACCCAAACGTGTTTCTGGTGCTCGTCATTATCCA 764 Query 137342 GGCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTGG 137401 |||||||||| || || ||||| || |||||| |||||||| ||| | | ||| | Sbjct 763 GGCAGACCTCAATAAAATGGTTCCCCGAGCCCAGCGTGCCCAGGTGGGTAATGTGGTTAG 704 Query 137402 CGTTCTTCAGCGCCGGGTACTTCTCGCAGAGCTTGTCGAACC 137443 |||| | | |||| | || |||||||| ||||||| Sbjct 703 ACTTCTCGAAAGAGGGGTTCCGCTTGCAGAGCTCCTCGAACC 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690075391059600