Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq779 125 1e-23 >seq779 Length=7186 Score = 125 bits (138), Expect = 1e-23 Identities = 546/843 (65%), Gaps = 63/843 (7%) Strand=Plus/Minus Query 168271 AACCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGG 168330 |||||||||||||||| ||||| || ||| ||||||| | |||||| | || |||| Sbjct 1477 AACCCTTGACGCACAAGACCTGATTAAGGATGGCGACCACCTCCACAAGGTCACTTTGGG 1418 Query 168331 CCGCCATGACGAGT-TCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCG 168389 | |||||| ||| || || |||||| ||| |||| ||||| || | || || ||| Sbjct 1417 CGTTCATGAC-AGTATCAATGTTCTTGTACGCCCTCGGTGTCTCATCCAGGACCCCCTCG 1359 Query 168390 TCCTTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGA--CG-AGC 168446 ||||| | |||| || || |||| ||| ||| || || || | || || || Sbjct 1358 TCCTTCCTGCACGTCACCCCGGCCGTGTCTTGGACATGATCACTGAGAGTGAACCGTCGC 1299 Query 168447 TT--CTTCGCCGCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGG 168504 || | ||||| | | | || | |||||| |||||||| ||| |||||| || Sbjct 1298 TTCGCCTCGCCCCTG--CTGTAC---AGGCGGCCCGCGCCGTGAGAGCAGGAGCAGTAGC 1244 Query 168505 CGTCAGCGTGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCATCGAACCCGGAATGA 168564 || || ||||||||| || || || | | || |||||||| || ||||||| Sbjct 1243 TCTCGTGGTTGCCCTTGCCCCGGACAATATAGCTCCGCGCCCCCATCGAGCCAGGAATGA 1184 Query 168565 TGCCGAGTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGT------CACGAAGATGT 168618 | || || | | || ||||| || || |||||||| ||| | ||| Sbjct 1183 CCGCCAGCTCCCCTTCCTTGGCCGAGGTGGCCCCTTTGCGGGTCAGCCACACCACCCTGT 1124 Query 168619 CCTC-GCCGAAG--TGGCGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGC---TT 168672 | || ||| | ||||| ||| || || ||||| || ||||||||||| Sbjct 1123 CGTCTGCCACCGCATGGCGCTCC------ACATAATTGTGATGGCAGTTCACCGCCGTGG 1070 Query 168673 CCTTGT---CGGT------CTTGAACGCCGGCACGAACTCCCGGATCGCCTTGAGCACGC 168723 | ||| |||| || | | ||||| || |||||||||| || | | Sbjct 1069 CGCTGTCCACGGTGAGTGGGATGGAGGACGGCAGTGACCGGCGGATCGCCTCGATCGTCC 1010 Query 168724 GGACCATCATCATGTCGCGGTTCAGGCGCGCGAAGTCTTGCGCCCAGCCCACGGCTTCGA 168783 | ||||||| | ||||||| | ||| ||| |||||||| |||| || || | Sbjct 1009 GCTCCATCATGAGACGGCGGTTCCACAGGGCGTAGTTCTGCGCCCACTCCACCGCCTCCA 950 Query 168784 TGTAGTCGTCGAA--ATCCTGCTCGCCCACTTCGAGCCACGCGAGGTTCTCGTCCTGCGG 168841 || || ||| | ||| || ||| | || || | || |||| || | ||||| Sbjct 949 CATACTCCCTGAAGTGTACTG-TC-CCCTCCTCCAGGTAGGCCAGGTCCTGG---TGCGG 895 Query 168842 GCGCACATGGCGC---TTTGCCAGGGCGTTCTTCGCCTTCTCGATGAAGTAGTTGCCGAT 168898 | || || || || ||| | | ||||| || |||| ||| || | ||||||| Sbjct 894 GAGCGTGTGCAGCACATTCCCCATGTCCTTCTTGGCGGTCTCAATGTAGGTGCTGCCGAT 835 Query 168899 CACGTTGCCGACGCCGCGCGATCCCGAGTGCAGCATCACCCACACG---TTCGGGTCCGT 168955 |||||||| || || || || ||||||||||||||||| ||| ||| ||| | | Sbjct 834 GCGGTTGCCGATCCCCCGAGAGCCAGAGTGCAGCATCACCCAAACGTGTTTCTGGTGC-T 776 Query 168956 CGTCCCCTGATCGGTCTGGATGCAGATTTCGATGAAGTGGTTGCCGCCACCCAGCGACCC 169015 |||| || | | | ||||| || || || ||||| || ||||||| || Sbjct 775 CGTC-----AT---TATCCAGGCAGACCTCAATAAAATGGTTCCCCGAGCCCAGCGTGCC 724 Query 169016 GAGTTGGGTCACGTTGTTCGACGTCTC-CAAGATCGGATGCTTTTCGCACAGCTTCTTGA 169074 || ||||| | || ||| ||| |||| |||| || | | || ||| |||| || || Sbjct 723 CAGGTGGGTAATGTGGTTAGACTTCTCGAAAGAGGGGTTCCGCTT-GCAGAGCTCCTCGA 665 Query 169075 ACC 169077 ||| Sbjct 664 ACC 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895677349622760