Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq779 152 7e-32 >seq779 Length=7186 Score = 152 bits (168), Expect = 7e-32 Identities = 535/821 (65%), Gaps = 32/821 (4%) Strand=Plus/Minus Query 135408 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 135467 ||||| ||||| | ||| || || ||| || ||| | ||||| ||||| | ||||| Sbjct 1475 CCCTTGACGCACAAGACCTGATTAAGGATGGCGACCACCTCCACAAGGTCACTTTGGGCG 1416 Query 135468 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 135527 | |||||| | || |||| |||||| ||| |||| | || || | || || ||||| Sbjct 1415 TTCATGACAGTATCAATGTTCTTGTACGCCCTCGGTGTCTCATCCAGGACCCCCTCGTCC 1356 Query 135528 TTACGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAG-GTCGCCTT 135586 || | |||| ||| || | ||| | | || || || || ||||| ||||| || Sbjct 1355 TTCCTGCACGTCACCCCGGCCGTGTCTTGGACATGATCACTGAGAGTGAACCGTCGC-TT 1297 Query 135587 GGCCTGGGTCC-GCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCG 135645 |||| | || || | | | ||||||||||||| ||||| |||||| | || Sbjct 1296 CGCCTCGCCCCTGCTGTACAGGC-GGCCCGCGCCGTGAGAGCAGGAGCAGTAGCTCTCGT 1238 Query 135646 CATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGA 135705 ||||||||||| || || || ||| | |||||||||||||| || |||| | | | Sbjct 1237 GGTTGCCCTTGCCCCGGACAATATAGCTCCGCGCCCCCATCGAGCCAGGAATGACCGCCA 1178 Query 135706 ACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCA---CGAAGACCCACTCGTC-G 135761 || | | || ||||| || || |||||||||| | |||| ||||| | Sbjct 1177 GCTCCCCTTCCTTGGCCGAGGTGGCCCCTTTGCGGGTCAGCCACACCACCCTGTCGTCTG 1118 Query 135762 AAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGC---TTCCTTGTCC--- 135815 | || | || || || ||||| |||||||||||||| | ||||| Sbjct 1117 CCACCGCATGGC-GCTCCACATAATTGTGATGGCAGTTCACCGCCGTGGCGCTGTCCACG 1059 Query 135816 --GTCTTGAACGGCGGCAGGC-CCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATC 135872 | | | | || || ||| ||| || || ||||| | ||| ||||||| Sbjct 1058 GTGAGTGGGATGGAGGACGGCAGTGACCGGCGGATCGCCTCGATCGTCCGCTCCATCATG 999 Query 135873 ATCTCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGG 135932 | |||||| | | ||| ||| ||| |||| | || || ||||| || || | Sbjct 998 AGACGGCGGTTCCACAGGGCGTAGTTCTGCGCCCACTCCACCGCCTCCACATACTCCCTG 939 Query 135933 AACTCCGGT-TCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGTC 135991 || | | || ||| | | || | || ||||||| || | | || || || | Sbjct 938 AAGTGTACTGTCCCCTCCTC-CAGGTAGGCCAGGTCCTGGTGCGGGAGCGTGTGCAGCAC 880 Query 135992 ACGCCGCAGCATCATCTCCTTGGCCTTCTCGATGAAGATACGGCCGATGGTGTTGCCGAC 136051 | || ||| || |||||| |||| ||| || | | ||||||| |||||||| Sbjct 879 ATTCC---CCATGTCCTTCTTGGCGGTCTCAATGTAGGTGCTGCCGATGCGGTTGCCGAT 823 Query 136052 GCCGCGCGAGCCCGAGTGGAGCATCACCCAGACGCG---CTGGTCCTCG------TCGAG 136102 || || ||||| ||||| ||||||||||| ||| | ||||| |||| || || Sbjct 822 CCCCCGAGAGCCAGAGTGCAGCATCACCCAAACGTGTTTCTGGTGCTCGTCATTATCCAG 763 Query 136103 GCAGACCTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTGGC 136162 ||||||||| || || ||||| || |||||| |||||||| ||| | | ||| | Sbjct 762 GCAGACCTCAATAAAATGGTTCCCCGAGCCCAGCGTGCCCAGGTGGGTAATGTGGTTAGA 703 Query 136163 GTTCTTCAGCGCCGGGTACTTCTCGCAGAGCTTGTCGAACC 136203 |||| | | |||| | || |||||||| ||||||| Sbjct 702 CTTCTCGAAAGAGGGGTTCCGCTTGCAGAGCTCCTCGAACC 662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700375167031320