Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq779 118 2e-21 >seq779 Length=7186 Score = 118 bits (130), Expect = 2e-21 Identities = 592/930 (64%), Gaps = 65/930 (7%) Strand=Plus/Minus Query 139584 CGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGCGTTGCCCTTGCCGCGCACGATG 139643 || ||||||||||| ||||| |||||| | ||| |||||||||||| || || || Sbjct 1274 CGGCCCGCGCCGTGAGAGCAGGAGCAGTAGCTCTCGTGGTTGCCCTTGCCCCGGACAATA 1215 Query 139644 TAGGACTTGGCCCCCATCGAGCCGGGGATGATGCCGAACTGGTCCTTCTGAGCCGACACC 139703 ||| | |||||||||||||| || |||| | | || | | || ||||| Sbjct 1214 TAGCTCCGCGCCCCCATCGAGCCAGGAATGACCGCCAGCTCCCCTTCCTTGGCCGAGGTG 1155 Query 139704 GCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGGAACTCCTT----CTGGACGTA 139759 || || |||||||||| | ||| | |||| || || | | || || || Sbjct 1154 GCCCCTTTGCGGGTCAGCCACACCACCCTGTCGTC-TGCCACCGCATGGCGCTCCACATA 1096 Query 139760 GTTGTGGTGGCAGTTCACCGCTT---CCTTGTCCGTCTTGA---------AGGGCGGCAG 139807 ||||| |||||||||||||| | ||||| ||| ||| |||||| Sbjct 1095 ATTGTGATGGCAGTTCACCGCCGTGGCGCTGTCCACGGTGAGTGGGATGGAGGACGGCAG 1036 Query 139808 -GCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCATCTCGCGGTTGATCCGCG 139866 | ||| ||| || || || | ||| |||||| | |||||| | | | Sbjct 1035 TGACCG----GCGGATCGCCTCGATCGTCCGCTCCATCATGAGACGGCGGTTCCACAGGG 980 Query 139867 CGAAGTCCTGACCCCAGGCGACGGCTTCCACGTAGTCGTAGAATTC--CGGCTCGCCTTC 139924 || ||| ||| |||| | || || ||||| || || ||| | | | || ||| | Sbjct 979 CGTAGTTCTGCGCCCACTCCACCGCCTCCACATACTCCCTGAAGTGTACTG-TCCCCT-C 922 Query 139925 CGACAGCCACGCGAGGTCCTTGTC---GAGCGGCTTCTG-ACCGTCCCGACGCAGCATCA 139980 | ||| | || ||||||| || ||||| | | | || |||| | | || Sbjct 921 CTCCAGGTAGGCCAGGTCCTGGTGCGGGAGCGTGTGCAGCACATTCCCCATG-----TC- 868 Query 139981 TCTCCTTGGCCTTCTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCG 140040 || |||||| |||| ||| || | | ||||||| |||||||| || || ||||| | Sbjct 867 -CTTCTTGGCGGTCTCAATGTAGGTGCTGCCGATGCGGTTGCCGATCCCCCGAGAGCCAG 809 Query 140041 AGTGGAGCATCACCCAGACGCG---CTGGTCCTCG------TCGAGGCAGACCTCGATGA 140091 |||| ||||||||||| ||| | ||||| |||| || ||||||||||| || | Sbjct 808 AGTGCAGCATCACCCAAACGTGTTTCTGGTGCTCGTCATTATCCAGGCAGACCTCAATAA 749 Query 140092 AGTGGTTGCCGCCGCCCAGCGTGCCCAGTTGGACGACGCTGTTGGCGTTCTTGAGGGTCT 140151 | ||||| || ||||||||||||||| ||| | | ||| | |||| || | Sbjct 748 AATGGTTCCCCGAGCCCAGCGTGCCCAGGTGGGTAATGTGGTTAGACTTCTCGAAAGAGG 689 Query 140152 TGTACTTGTCGCAGAGCTTCTCGAACCGGGCTTCCAGGCCCGAGTCGAC--CCACTTGCG 140209 || | | |||||||| |||||||| ||| | ||| | || | |||| | Sbjct 688 GGTTCCGCTTGCAGAGCTCCTCGAACC---CTTTC--GCCAAATGCGTCTTCCACACCCT 634 Query 140210 CATGATCGAGTTCGGGATGCCGCTACGCCCGTTCCAGCCG----CCCGACG--GACC--- 140260 | || | ||| | | || | || | ||| || | | ||| |||| Sbjct 633 CTGGACATTCTCCGGCACCTCTCTGCACCAGCTCCCCGCGTCTACACTACGGCGACCGCT 574 Query 140261 ---CGGCCCGCCGTGCGGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCGAGGCTGTC 140317 | || |||||||||||| | |||||| | |||| ||| | || || | Sbjct 573 GTGGGTCCTGCCGTGCGGGACAGACGCCTCGATTTCGTAACGCATGTTGTCCAGTGTGGC 514 Query 140318 GGGCAGGTCCGAGGCCTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCAC 140377 || || | || |||| || || ||| || ||||||||||| || ||||| || Sbjct 513 CGGAAGTTGTTCCGCTGTCAGGGACGTTTTCACCGCAATCATGCCGCACCCAATGTCGAC 454 Query 140378 GCCCACGGCCGCCGGGATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCC 140437 |||||| || ||||| | |||||| |||| || ||||| | ||||| || |||| Sbjct 453 CCCCACGCTGGCGGGGATAAGGGCGCCACTGGTGGGAATCACGGTACCCACCGTGCAGCC 394 Query 140438 GATGCCCATGTGGACGTCCGGCATCAGGGC 140467 ||||| ||| || || ||||| | ||| Sbjct 393 AATGCCGCCGTGCACATCGGGCATAATGGC 364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715704842918400