Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq753 212 1e-49 seq3286 187 5e-42 >seq753 Length=7390 Score = 212 bits (234), Expect = 1e-49 Identities = 850/1314 (65%), Gaps = 52/1314 (4%) Strand=Plus/Plus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||||| ||| | ||| ||||||||| || ||| ||||| || ||||| || ||| Sbjct 2856 GTAAATGTTGGTGGTGAAGGGCTCGAAGCACTCATTGTTACCGAGAATTTGACTGGTGGA 2915 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCG 213067 ||| |||||||| || ||||||| ||| ||| | || ||| ||| | ||| ||| Sbjct 2916 GGCGGTGGGCATCGGCGCCACCAACAGAGAGTTTCGCATACCGG--TCGTCT-TGACGCG 2972 Query 213068 CCGA---AGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACAT 213124 | || | |||||| ||| | ||| || || | |||| | ||| | Sbjct 2973 CTCCTTCAGGGCGTCCCAGTTCCAGCGGCCGCTCA---CCGGCTTCTTCTC---CCAGAG 3026 Query 213125 GTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGT---AGGGGCC 213181 || ||||||| | ||||| | |||||||||| || || ||| | | || || Sbjct 3027 ATCGAACTGCAGAAGGCCTTGGGAGGCGGGGCTGCC--GGGAA-AGGTTTCATACGGTCC 3083 Query 213182 ATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATAT 213241 | | || |||| || ||| | || || || |||||||||||||| || || || Sbjct 3084 CTCCACCGCCGCCAAGTCCACGGAGGACTCCACCGCGGCGTAGTAGATGGTCTCGAAGAT 3143 Query 213242 CTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACAC 213301 ||| ||| | | || ||||| | ||||||||| | | | | || | Sbjct 3144 GTCCTCGTTCAACCGCTGCGCCTCCTCGCTCGTGAAGGGGAGGCGAAGGAGAATAAAGGC 3203 Query 213302 ATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGA-CTTGGAGC 213360 || |||| |||||| || |||| ||||| || | || || || |||| | | || Sbjct 3204 GTCCGCCAACCCCTGCACGCCGAGGCCGACCGGGCGGTTTCGCATGTTACTGCGTCTGGC 3263 Query 213361 ACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTT 213420 | |||| |||||| |||||| ||| |||| |||||| ||| ||| | | | Sbjct 3264 CGTT-TCCACGGGGTAGTAGTTGCGGTCAATGACTCGGTTGAGATTGTAGGTCACGTCCT 3322 Query 213421 TGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAG 213480 ||||||| | | || | || ||| | || ||| | || | ||| || | Sbjct 3323 TGGTGACCTCGTAGAGCTTCTGGTGGTCAAAGACGCCCTTCTCGGTGTCCACGAAGCGGG 3382 Query 213481 GCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGA 213540 | ||||||||| ||||| |||||| || ||| ||| | | ||||||||||| | Sbjct 3383 GGAGGGCGATGGAGGCCAAGTTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAA 3442 Query 213541 TCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGT 213600 ||||||||||||||||| ||| |||||||||||| || | ||||| |||||| || Sbjct 3443 TCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGGT 3502 Query 213601 TGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCT 213660 || ||| |||||||| |||||| | ||| |||||||| | ||||||| |||| || Sbjct 3503 TGCAAGAGTCCTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATGG 3562 Query 213661 GGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTG-ACAGCTCCGGGCGTAGCCTCGTA 213718 | ||| || | | || || || || || ||| || | | |||||| Sbjct 3563 CGAACCACAGCT-CTTGCGCGGCGATGGTGCGGATGCCCAGACCCTGTC----TCTCGTA 3617 Query 213719 CTGTTCGTAGAGCTCGTTGAATTCGTGGCC---CCAGACCCTGTCCAGTCCCGGACAG-G 213774 || ||||| || | || || | ||| ||| | || ||| || | ||| Sbjct 3618 CTCCTCGTACTTCTTCTCAAACTCCTCGCCGTGGCAGTCGCT---CAGGCCGGTGCAGAT 3674 Query 213775 ATGCGGGACACATGAGGCTCCAGTCCCCGTC-ATCTCTGACTCTCTGCATGAACAGGTCC 213833 ||| ||| | ||| || |||| | || || ||| |||| | || |||||| || || Sbjct 3675 ATGGGGGTC-CATCAGCGTCCACTTGCCCTCGCTCT-TGACACGCTTCATGAAGAGATCG 3732 Query 213834 GGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTT---T 213890 |||| ||| || ||| ||| || || | || | | || ||| || | ||| Sbjct 3733 GGGATCCAGAGGGCGTAGAAGAGATCACGGGCACGGTTGTCCTCCTTACCGGTGTTACGC 3792 Query 213891 TTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAG 213950 || | ||| || || ||||| ||||| |||||||| ||||| | ||||| ||||||| Sbjct 3793 TTCAGGAGA---AGGAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAG 3849 Query 213951 GCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGC 214007 || ||| ||||| |||||||||||| || | ||| | || | | ||| Sbjct 3850 GCACCCTTTCTCTTACCGCCGCCCTGGTCGACGTAACGGGCGGTATTATTCCACACGCGA 3909 Query 214008 AGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCC 214067 || | || || | ||||| ||| |||||||| ||||| || || |||| || Sbjct 3910 AGCATCGGCACTAAACCGTTCGACGTCCCGTTGGTACCCGCAATGTAACTTCCGGCGGAA 3969 Query 214068 CTCAGGTTGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGC 214127 | | |||| || | || || ||||||||||| ||||| ||| |||||||| | Sbjct 3970 CGAATGTTGTGCACGTGGAAACCGATGCCACCGGCAGACTTGCTGATGATGGCGCATTCC 4029 Query 214128 CTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGC---AG 214184 ||| || || |||||| | || ||||| || | | | | |||||||| | Sbjct 4030 TTCAGCGTATCGTAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAA 4089 Query 214185 CTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGG 214238 ||| | ||| || ||| | || | |||||| || |||||| |||| ||| Sbjct 4090 CTC---ATCTGAGGGTTGGGGGTACCGGCGTTGAAGAGGGTGGGGGTGGCGTGG 4140 >seq3286 Length=1922 Score = 187 bits (206), Expect = 5e-42 Identities = 538/817 (66%), Gaps = 13/817 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| || || | ||||| |||||||| ||||| || | ||||| |||| Sbjct 1534 CTGGTAGTCACCAACCTTCTTCTCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTC 1475 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| ||||||||| | | ||| || | | | ||| | ||||||| Sbjct 1474 CATGAAGTCGAAGGGGTTCGTCGCGTTGTAGTGCTTCGCCTCGCCAAGGGAGACCAGCAG 1415 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||| ||| |||| ||||| | ||| | |||||| || || ||| Sbjct 1414 ACGGTCCGCCACGAACTCAATGTACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCG 1355 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 |||||| | | || || ||||||||||| || | |||||| || | || | Sbjct 1354 CACGGGGAGGGACTCGCAGATGAACTCCTTCTCGATGTCCACGGCATCGGTGATGATGTT 1295 Query 48079 CTTAACGCGGGACTCT---GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || | ||||| | ||| || || |||| ||| || Sbjct 1294 CAGCACGCG---CTCGCGCGACAGCTTGTTCTTGATGTGGCTGTTGTACAGCAGGCACGC 1238 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 ||||||| |||||| || ||||| ||| || ||| ||||| |||| || || || Sbjct 1237 AAAGTCCGTGTGCAGACCCTCGTCACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGG 1178 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| || || | || || |||||||| || || ||| ||||| |||||||||||||| Sbjct 1177 CATCACGCCGCGCTTCTTCAGCCAGAAGATCGCGCAGAAGGAGCCGGAGAAGAAGATGCC 1118 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315 |||||| ||||| ||| || || | ||| | | ||| || || | | |||||| Sbjct 1117 CTCCACCGCCGCAAACCCGAGCAGGCGCTC-CTGGAAG-CTCG-CCTCGCTTCCGATCCA 1061 Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 | | |||||| || |||||||||| |||||| || ||||||| || || | | || Sbjct 1060 GCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAG 1001 Query 48376 CTTCTTGCACTCACCT-GC-GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433 |||| || || ||| || ||||| | || || |||||| | ||| |||| Sbjct 1000 CTTC-AGC-TTCTCCTCGCTGTCCGTGATGTACGTGTCCAGCAGCACAGAGTAGGTCTCG 943 Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493 ||||| | ||||| || | |||||| |||||||| || | |||||| ||||| Sbjct 942 GAGTGGATGTTCTCCATCATCAGCTGGAAGCCGTAGAACGCACGGGCCTCCGGCACCTTG 883 Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553 || || | ||| | || | || |||||| | || || || || |||| ||| Sbjct 882 ACGTCCGACATGAAGCGCTGCGCGAGGTTCTCAATCACGATGCCGTCGCTGCCAGCGAAG 823 Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613 |||||||| || | || | ||| || ||||| | || | |||||| || Sbjct 822 AAGGCAAGCACGTACTTGATGAAGTGCTGCTCGCCCTCCGTCATCTTCTTCCAGTCCGTC 763 Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGA 48650 | ||| || ||||| || | || |||| ||||||| Sbjct 762 AGGTCATTTCCCAGATCGATCTCCTCCAGCGTCCAGA 726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931440193995520