Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq753 230 4e-55 seq3286 181 2e-40 >seq753 Length=7390 Score = 230 bits (254), Expect = 4e-55 Identities = 697/1061 (66%), Gaps = 37/1061 (3%) Strand=Plus/Plus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482 || |||| |||||||||||| ||||| || ||| | | || ||||| ||| Sbjct 3118 GCGGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTCAACCGCTGCGCCTCCTCGCTCGTG 3177 Query 221483 AAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542 ||||| | || || | |||| |||| |||| ||||| || |||| |||| || Sbjct 3178 AAGGGGAGGCGAAGGAGAATAAAGGCGTCCGCCAACCCCTGCACGCCGAGGCCGACCGGG 3237 Query 221543 CTGTGTCTCCTGTTG--GAAGC-GGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATC 221599 | || || | |||| | | ||||| ||| |||||| || ||||| ||| || Sbjct 3238 CGGTTTCGCATGTTACTGCGTCTGGCCGTTTC---CACGGGGTAGTAGTTGCGGTCAATG 3294 Query 221600 AGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAAC 221659 | |||||| || || | | | || |||||| ||||||||||| | || Sbjct 3295 ACTCGGTTGAGATTGTAGGTCACGTCCTTGGTGACCTCGTAGAGCTTCTGGTGGTCAAAG 3354 Query 221660 ACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGG 221719 || ||| | || || | ||||| || | ||||| | | ||||| | Sbjct 3355 AC------GCC--CTTCTCGGTG----TCCACGAAGCGGGGGAGGGCGATGGAGGCCAAG 3402 Query 221720 TTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTG 221779 || ||||| ||| |||||||||| |||| |||| || ||||| || || |||||| | Sbjct 3403 TTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAATCTCGGTGCACAGGTTGGAG 3462 Query 221780 CACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGC 221839 ||||||||||| ||||| | || || || ||||| || ||| || ||||||||| ||| Sbjct 3463 CACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGGTTGCAAGAGTCCTTGTACAGC 3522 Query 221840 AT-AAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGC 221898 || ||||||| | || ||||||| ||| | | ||||||| | ||| || ||| || Sbjct 3523 ATGAAAGGGA-CACCGGTCTCCACCTGGGACTCCAGAATGGCGAACCACAGCTCTTGCGC 3581 Query 221899 GCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAA 221958 | | || | || | ||||| ||| | || ||| | || | | ||||| Sbjct 3582 GGCGATGGTGCGGATGCCCAGACCCT--GTC-TCTCGTACTCCTCGTACTTCTTCTCAAA 3638 Query 221959 CTTTTCACCGTACGCCTCGTCCAGGCC--TGGACACCTGGCGGGACACATCAGACTCCAG 222016 || || |||| ||| |||||| || | | ||| ||| | |||||| |||| Sbjct 3639 CTCCTCGCCGTGGCAGTCGCTCAGGCCGGTGCAGATATGG-GGGTC-CATCAGCGTCCA- 3695 Query 222017 TGCTTG---TTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAG 222073 |||| | | ||||| | || ||||||||| || |||||||| || || | ||| Sbjct 3696 --CTTGCCCTCGCTCTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGTAGAAG 3753 Query 222074 AGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAA 222133 ||||| | || || | |||||| ||| |||| | |||| | ||||||||| Sbjct 3754 AGATCACGGGCACGGTTGTCCTCCTTACCGGTGTTACGCTTCAGGAGAAGGAACTCAAAA 3813 Query 222134 ATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCC 222193 ||||| |||||||| ||||| || |||||||| | || || || ||| ||| ||| Sbjct 3814 ATGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTTTCTCTTACCGCCGCCC 3873 Query 222194 TGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGAT 222253 || || || | | | || | | |||||| |||| || | ||||| || Sbjct 3874 TGGTCGACGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGCACTAAACCGTTCGAC 3933 Query 222254 CGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGT--TACTGGCAGACATGC 222311 |||||||| ||| |||||| ||| ||| | | || | | | || | | Sbjct 3934 GTCCCGTTGGTACCCGCAATGTAACTTCCGGCGGAACGAATGTTGTGCACGTGGAAA--C 3991 Query 222312 CGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCT 222371 |||| |||||||| || ||| |||||||| ||| || || || |||||||| Sbjct 3992 CGATGCCACCGGCAGACTTGCTGATGATGGCGCATTCCTTCAGCGTATCGTAGATGCCCT 4051 Query 222372 CCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAAC 222431 | ||| ||| ||||| | | | || || ||||| |||||||| |||| || || Sbjct 4052 CGATACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAACTCATCTGAGGGTTGGGGGTAC 4111 Query 222432 AGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCC 222472 |||||| || || ||||| ||||||| || ||||||||| Sbjct 4112 CGGCGTTGAAGAGGGTGGGGGTGGCGTGGGTGAAGTAGCCC 4152 >seq3286 Length=1922 Score = 181 bits (200), Expect = 2e-40 Identities = 557/854 (65%), Gaps = 15/854 (2%) Strand=Plus/Plus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || ||| ||| ||||||| || | | || | |||||| || ||||| ||| Sbjct 689 GACATCTGGAAGAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGAT 748 Query 25534 CTGGCCAAGGACATGGACGG-CTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592 |||| || ||| || |||| |||| | | | | | ||||||||| || |||| Sbjct 749 CTGGGAAATGACCTG-ACGGACTGGAAGAAGATGACGGAGGGCGAGCAGCACTTCATCAA 807 Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCG-AGA 25651 ||||||| | || ||||| || | | || || || |||| ||||| || ||| || Sbjct 808 GTACGTGCTTGCCTTCTTCGCTGGCAGCGACGGCATCGTGATTGAGAACCTC-GCGCAGC 866 Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGT-TTCTACGGTTTCCAGATGGCC 25710 | |||| ||| || || ||||||| ||| |||||||| |||||| || Sbjct 867 GCTTCATGTCGGACGTCAAGGTGCCGGAGGCCC-GTGCGTTCTACGGCTTCCAGCTGATG 925 Query 25711 ATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTC 25770 || || || | ||||| ||| || | ||| ||| |||||||| || ||| | Sbjct 926 ATGGAGAACATCCACTCCGAGACCTACTCTGTGCTGCTGGACACGTACATCACGGACAGC 985 Query 25771 GCCGAGAGAGATCG-GCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829 | |||| || | |||| | || ||| || || || ||||| ||| |||||| Sbjct 986 GAGGAGA-AGCTGAAGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGC 1044 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 | |||||| || |||||| ||| || || | || ||||| ||| | | Sbjct 1045 GGAGTGGGCGGTGCGCTGGATCGGAAGCGAG---GCGAGCTTCCAGGAGCGCCTGCTCGG 1101 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCA 25948 ||||| || |||||||||||||| ||| ||| || || ||| || ||||||||||| | Sbjct 1102 GTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGC-GCGATCTTCTGGCTGA 1160 Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008 || || || |||||||| ||| ||| ||||||||| || | | ||||||| Sbjct 1161 AGAAGCGCGGCGTGATGCCCGGCCTGACCTTCAGCAACGAGCTGATTTCCCGTGACGAGG 1220 Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTC 26068 |||| |||| || ||||| |||||||| |||| ||||| | |||| | || | Sbjct 1221 GTCTGCACACGGACTTTGCGTGCCTGCTGTACAACAGCCACATCAAGAACAAGCTGTCGC 1280 Query 26069 AAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128 ||| ||| | ||||||| || || ||||| |||||||||||||| Sbjct 1281 GCGAGCGCGTGCTGAACATCATCACCGATGCCGTGGACATCGAGAAGGAGTTCATCTGCG 1340 Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGA-CTCATGAGCCAATACATTGAG 26187 | || |||||| | || | |||||||| ||||||||| Sbjct 1341 AGTCCCTCCCCGTGCGCCTGATTGGTATGAAC-TCGGAGATGATGAGCCAGTACATTGAG 1399 Query 26188 TATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAAC 26247 | ||||| |||| ||||||| | || || || | | ||||| || | ||| Sbjct 1400 TTCGTGGCGGACCGTCTGCTGGTCTCCCTTGGCGAGGCGAAGCACTACAACGCGACGAAC 1459 Query 26248 CCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGG 26307 || |||||||| ||||| | || || | || |||||||||||||| || |||| | Sbjct 1460 CCCTTCGACTTCATGGAGATGATCTCCCTCCCTGGCAAGACCAACTTCTTCGAGAAGAAG 1519 Query 26308 GTCGGCGACTATCA 26321 || || ||||| || Sbjct 1520 GTTGGTGACTACCA 1533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928752461216320