Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3286 147 3e-30 seq1511 89.7 6e-13 >seq3286 Length=1922 Score = 147 bits (162), Expect = 3e-30 Identities = 309/450 (69%), Gaps = 17/450 (4%) Strand=Plus/Plus Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCT 65136 |||||||| | | ||||||| |||||||| |||||||||||||| || |||||||| Sbjct 1088 GAGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCG 1147 Query 65137 ATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATT 65196 || | ||| |||||||||| || | ||||| ||||| |||| || || || ||| Sbjct 1148 ATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCCGGCCTGACCTTCAGCAACGAGCTGATT 1207 Query 65197 TCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTG-GAGCTCTTCAAGACTTTGCGTAA 65255 ||||| || |||||||| ||| ||| |||| |||| ||| | ||| | || | Sbjct 1208 TCCCGTGACGAGGGTCTGCACACGGACTTTG-CGTGCCTGCTGTACAACA----GCCACA 1262 Query 65256 T--AGACCCA-CTACCGAAACTATC-CACGC----CATCGTGAAAGAGGCGGTTGAGATT 65307 | ||| | | || || | | | | || |||| | | || || || || || Sbjct 1263 TCAAGAACAAGCTGTCG-CGCGAGCGCGTGCTGAACATCATCACCGATGCCGTGGACATC 1321 Query 65308 GAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAG 65367 ||||| | |||||||| || | ||||| || || ||||||||||| |||| | Sbjct 1322 GAGAAGGAGTTCATCTGCGAGTCCCTCCCCGTGCGCCTGATTGGTATGAACTCGGAGATG 1381 Query 65368 ATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGG-GGTGCCACC 65426 ||| | |||||||||||| ||| |||| ||||| || |||| | || | Sbjct 1382 ATGAGCCAGTACATTGAGTTCGTGGCGGACCGTCTGCTGGTCTCCCTTGGCGAGGCGAAG 1441 Query 65427 CATTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGAC 65486 || | ||||||| ||| || || ||||| ||||| | || ||| ||| ||||| Sbjct 1442 CA-CTACAACGCGACGAACCCCTTCGACTTCATGGAGATGATCTCCCTCCCTGGCAAGAC 1500 Query 65487 CAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||||||| |||||| ||||| ||||| Sbjct 1501 CAACTTCTTCGAGAAGAAGGTTGGTGACTA 1530 >seq1511 Length=4254 Score = 89.7 bits (98), Expect = 6e-13 Identities = 224/333 (67%), Gaps = 23/333 (7%) Strand=Plus/Minus Query 177585 CTCCCCCGTCGCGACAACATATTCATCAGCCTCTTCTTGTTGAAGCATGAGCCACATGGC 177644 |||||| || |||| ||| | || || | || || ||||| | |||||||||||| | Sbjct 3377 CTCCCCGGTGGCGAGGACAAAGTCTTCGGGCTTGTCGTGTTGCATGATGAGCCACATGCC 3318 Query 177645 TTCAACATAGTCCTTGGCATGACCCCAGTCTCTGGCAGCGTTGAGGTTACCGAGTTCAAG 177704 | ||||||||||| ||||| |||||||||| | ||||||| ||||||||| || Sbjct 3317 ATACACATAGTCCTTCGCATGGCCCCAGTCTCGGAGCGCGTTGACGTTACCGAG---GAG 3261 Query 177705 GAACTCTCTCTCACCTTTCACAATTTGTTTGACGCCATCAG---------TAATCTTCTT 177755 | | | || || ||| | || |||| || | | |||||| || Sbjct 3260 G-AGTTGCT-TCTGCTT----GTTGTGCTTGATGCGGACGGCGGCGCGGACAATCTTTTT 3207 Query 177756 TGTGAC-AAAGTCGGCACCTCGTCTCGGTGATTCGTGGTTGAAGAGGATTCCGGAGCAGG 177814 || || || ||| ||||| || | || || ||||| || ||||| || ||| || | Sbjct 3206 GGTCACGAACGTC-GCACCACGGCGGGGGGACTCGTGATTAAAGAGAATACCGTTGCTCG 3148 Query 177815 CATACATACCATAGGATTCTCGGTAATTTTTGACGAGCCAGTGAGCGGCCAATTTGGAGA 177874 || ||||| || || || ||||| || ||||| | |||| ||| | |||| || Sbjct 3147 CAAACATATTGTACGACTCGCGGTAGTTCTTGACAATCCAGAAGGCGTAGAGCTTGGCGA 3088 Query 177875 CGCCATA--GACGGATCGTGGGTAGAAGGGTGT 177905 || | || ||| | || ||||||||||| || Sbjct 3087 CGGCGTAGGGACTG-GCGGGGGTAGAAGGGGGT 3056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596510293524640