Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq753 159 4e-33 seq3286 145 9e-29 >seq753 Length=7390 Score = 159 bits (176), Expect = 4e-33 Identities = 201/276 (73%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 1630062 GCACTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTT 1630121 || |||||||||||| || || || | || | ||||| ||||| ||||| | ||||| Sbjct 3870 GCCCTGGTCGACGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGCACTAAACCGTT 3929 Query 1630122 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAA 1630181 ||| |||||||| ||||| | ||| ||||||| || | |||||| || || Sbjct 3930 CGACGTCCCGTTGGTACCCGCAATGTAACTTCCGGCGGAACGAATGTTGTGCACGTGGAA 3989 Query 1630182 GCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCC 1630241 |||||||| ||||| |||||| ||||| ||||| | || ||||| ||||||||||| Sbjct 3990 ACCGATGCCACCGGCAGACTTGCTGATGATGGCGCATTCCTTCAGCGTATCGTAGATGCC 4049 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| |||| |||||||| | || | ||||| || | || |||| | || Sbjct 4050 CTCGATACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAACTCATCTGAGGGTTGGGGGT 4109 Query 1630302 GCCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAA 1630337 |||||||||||||| ||||| || || |||||| Sbjct 4110 ACCGGCGTTGAAGAGGGTGGGGGTGGCGTGGGTGAA 4145 Score = 104 bits (114), Expect = 3e-16 Identities = 281/435 (65%), Gaps = 8/435 (2%) Strand=Plus/Plus Query 1628170 ATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGGTGGTCAGG 1628229 ||||||||||||||||||| || | | || ||||| || | |||||||| | || Sbjct 3442 ATCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGG 3501 Query 1628230 TTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCGCGACGATG 1628289 ||| | |||||||| |||||| | || | |||||||| | ||| | | | | ||| Sbjct 3502 TTGCAAGAGTCCTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATG 3561 Query 1628290 GCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGC---GGCCCTNNNNNNNNNNN 1628346 || |||| | || |||||| ||| || || || | |||| Sbjct 3562 GCGAACCACAGCTCTTGCGCGG---CGATGGTGCGGATGCCCAGACCCTGTCTCTCGTAC 3618 Query 1628347 NNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGG-GCGCCTCGGA 1628405 ||||| || |||||| ||| ||| |||||||| || | | Sbjct 3619 TCCTCGTACTTCTTCTCAAACTCCTCGCCGTGGCAGTCGCTCAGGCCGGTGCAGATATGG 3678 Query 1628406 CGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCACACGT 1628465 || | | |||| ||| | ||| || || | || ||| ||||| || | Sbjct 3679 GGGTCCATC-AGCGTCCACTTGCCCTCGCTCTTGACACGCTTCATGAAGAGATCGGGGAT 3737 Query 1628466 CCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTGAG 1628525 ||| || ||||| ||||| || || || ||||| |||||||| ||| ||| || || Sbjct 3738 CCAGAGGGCGTAGAAGAGATCACGGGCACGGTTGTCCTCCTTACCGGTGTTACGCTTCAG 3797 Query 1628526 GTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTT 1628585 | || | || | ||||||||||||||| ||||| |||||| ||||||||| ||||| Sbjct 3798 GAGAAGGAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTT 3857 Query 1628586 GCGCTTGCCGCCGCC 1628600 | ||| |||||||| Sbjct 3858 TCTCTTACCGCCGCC 3872 Score = 95.1 bits (104), Expect = 1e-13 Identities = 348/545 (64%), Gaps = 14/545 (3%) Strand=Plus/Plus Query 1626984 GTCGACGGTAAACTGGATGGCGTCGGCGGCGGGCCTGGTGCGCAGATAGTACATGCCGGT 1627043 ||| ||||| |||| |||||| ||| |||||| | |||||| || |||||||||||||| Sbjct 2472 GTCCACGGTGAACTTGATGGCATCGACGGCGGCGCGGGTGCGGAGGTAGTACATGCCGGT 2531 Query 1627044 CTTGAGGCCGCGGCGCCACGCGTAGGCGTGCATCGACGTGATGCGCTCGGGCGTCGCGTC 1627103 |||||||||| |||| || | |||||| || ||||| | ||| | | | Sbjct 2532 CTTGAGGCCGGACTGCCAGCAGTGGAAGTGCATGGAGGTGATCTGGCCGGAGCTGGGGGA 2591 Query 1627104 GGCGCAGTACAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGATCGGCCGCCAT 1627163 | | | || || | ||||| |||||| | ||| ||||| |||| | ||| Sbjct 2592 CTCCAGGAAGAGATTCATGGACTGAGACTGGTCAATATACTTGGCGCGGGCGGCGGACAT 2651 Query 1627164 GTCGATGGTGACCCGGTTGGGCACCTCCCACACGGTCTTGAAGATGGCCTTGAGGTCGGG 1627223 ||| || || | || | |||||| ||||| | ||| |||| || || Sbjct 2652 GTCAATCAGCTTGCGCTGCGGAATCTCCCAAACGGTGCGGTAGAGCTCCTTCAGATCATC 2711 Query 1627224 CGGCACCTCGTCGTCGCCAAAGCCCTGCACCGAGCCGTGCGCCGCGACGAGCCTGTCGCG 1627283 ||| | ||||| | | | | || ||||||| | || || || || Sbjct 2712 CGGGATACCGTCG------ATTCGCAGGACGGAGCCGTTGAAGGTGATGATTTCGTTACG 2765 Query 1627284 AAAGTCGGGCGTCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGACCAC 1627343 | | ||||||| || || || || ||| |||||| |||| ||| || || Sbjct 2766 CAGCTTCTCATTCCACAGACCACGGGCGATGAGGTCCTTGACAAGGTATTTGTTCACAAC 2825 Query 1627344 GGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGC 1627403 | || || || ||| ||||| ||| |||||| |||||| | |||| | Sbjct 2826 CGGGAACTCCCCACTCAGCGTACGGCGGACGTAAATGTTGGTGGTGAAGGGCTCGAAGCA 2885 Query 1627404 CTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGGAGCGA 1627463 ||| |||| || || || || || | ||| |||||||| ||||||| | || || Sbjct 2886 CTCATTGTTACCGAGAATTTGACTGGTGGAGGCGGTGGGCATCGGCGCCACCAACAGAGA 2945 Query 1627464 GTTGCGCAGGCCGTGCTGTCGAACTAGCGCGC----GCAGCGCGTCCCAGTCCCAGCGGC 1627519 ||| |||| ||| |||| | ||||| ||| |||||||||| |||||||| Sbjct 2946 GTTTCGCATACCG----GTCGTCTTGACGCGCTCCTTCAGGGCGTCCCAGTTCCAGCGGC 3001 Query 1627520 CGCTC 1627524 ||||| Sbjct 3002 CGCTC 3006 >seq3286 Length=1922 Score = 145 bits (160), Expect = 9e-29 Identities = 216/301 (72%), Gaps = 14/301 (5%) Strand=Plus/Minus Query 868717 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGG 868776 |||||| |||||||||||||| ||| ||||||| |||||| | ||| ||||| | Sbjct 1513 CTCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTCCATGAAGTCGAAGGGGTTCGT 1454 Query 868777 CGTCTTGTAGTGCTTTTCGCAT--CCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCG 868834 || ||||||||| ||||| | || || || | ||||| ||||| || || ||||| Sbjct 1453 CGCGTTGTAGTGC--TTCGCCTCGCCAAGGGAGACCAGCAGACGGTCCGCCACGAACTCA 1396 Query 868835 ATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGACTCGCTC 868894 |||||||||| ||| | | | |||||| || || || ||| || || ||||||| Sbjct 1395 ATGTACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCGCACGGGGAGGGACTCGCAG 1336 Query 868895 ACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACG---TCGGCC 868951 | ||||| |||||||| || ||||| ||| |||||| | | ||||| ||| | Sbjct 1335 ATGAACTCCTTCTCGATGTCCACGGCATCGGTGATGATGT---TCAGCACGCGCTCGCGC 1279 Query 868952 GAGGGCTTG---TTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAGTGCA-ACCC 869007 || ||||| |||| | | | |||| |||||||| |||||||| ||||| |||| Sbjct 1278 GACAGCTTGTTCTTGATGTGGCTGTTGTACAGCAGGCACGCAAAGTCCGTGTGCAGACCC 1219 Query 869008 T 869008 | Sbjct 1218 T 1218 Score = 129 bits (142), Expect = 7e-24 Identities = 218/313 (70%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || | |||||||||||| || || | |||| | ||| | | Sbjct 942 GAGTGGATGTTCTCCATCATCAGCTGGAAGCCGTAGAACGCACGGGCCTCCGGCACCTTG 883 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || ||| |||||| || || |||||||| |||||||||||||||| | ||||| Sbjct 882 ACGTCCGACATGAAGCGCTGCGCGAGGTTCTCAATCACGATGCCGTCGCTGCCAGCGAAG 823 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGT-GGAC 869811 || || || |||| |||||| ||||| ||||| | || | | | | ||||| | | Sbjct 822 AAGGCAAGCACGTACTTGATGAAGTGCTGCTCGCCCTCCGTCATCTTCTTCCAGTCCGTC 763 Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 | ||| | || || | |||||| |||||||| || ||| || ||||| Sbjct 762 AG-GTCATTTCCCAGATCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGCTCCTTGTA 704 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCG 869931 | ||| ||| | | ||||| |||| ||||| || || ||||||| ||||||||| | Sbjct 703 CTTCTTCCAGATGTCGTGGTACTGGATCGGGAACAGCACGAAGCGGTAGGGGTTGTCCTG 644 Query 869932 CAACAGGGGTTCG 869944 |||||| ||| Sbjct 643 GCGCAGGGGCTCG 631 Score = 118 bits (130), Expect = 1e-20 Identities = 198/285 (69%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || |||| |||||||| |||| ||||||||||| | ||||||||| Sbjct 1222 ACCCTCGTCACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGGCATCACGCCGCGCTT 1163 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| ||||| |||||||| ||| ||||| ||||||||||| || || ||||| Sbjct 1162 CTTCAGCCAGAAGATCGCGCAGAAGGAGCCGGAGAAGAAGATGCCCTCCACCGCCGCAAA 1103 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 |||| || ||||| ||| ||| |||| | |||||| || |||||| Sbjct 1102 CCCGAGCAGGCGCTCCTGGAAG--CTCG----CCTCGCTTCCGATCCAGCGCACCGCCCA 1049 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 || ||||| ||| | |||| | ||| | ||| ||| | | || | ||| || Sbjct 1048 CTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCTTCAGCTTCTC 989 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | |||| ||| || ||||| | ||| | || |||||||| Sbjct 988 CTCGCTGTCCGTGATGTACGTGTCCAGCAGCACAGAGTAGGTCTC 944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106486539576101