Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3286 156 7e-32 seq753 134 2e-25 >seq3286 Length=1922 Score = 156 bits (172), Expect = 7e-32 Identities = 214/297 (72%), Gaps = 9/297 (3%) Strand=Plus/Minus Query 793925 CTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGC 793984 |||||| |||||||||||||| ||| ||||||| |||||| | ||| ||||| | Sbjct 1513 CTCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTCCATGAAGTCGAAGGGGTTCGT 1454 Query 793985 CGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAAT 794044 || |||||||||| | || || || | ||||| ||||| || ||||| ||||| Sbjct 1453 CGCGTTGTAGTGCTTCGCCTCGCCAAGGGAGACCAGCAGACGGTCCGCCACGAACTCAAT 1394 Query 794045 GTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGAC 794104 |||||||| ||| | | | |||||| || || || |||||| || ||||||| || Sbjct 1393 GTACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCGCACGGGGAGGGACTCGCAGAT 1334 Query 794105 AAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG---TCGGACGA 794161 ||||| |||||||| || ||||| ||| ||||||| | | ||||| ||| ||| Sbjct 1333 GAACTCCTTCTCGATGTCCACGGCATCGGTGATGATGT---TCAGCACGCGCTCGCGCGA 1277 Query 794162 CGGCTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTCGCAATGCAGACC 794215 | ||||| | || | | | |||| |||||||| |||||||| |||||||| Sbjct 1276 CAGCTTGTTCTTGATGTGGCTGTTGTACAGCAGGCACGCAAAGTCCGTGTGCAGACC 1220 Score = 138 bits (152), Expect = 2e-26 Identities = 228/326 (70%), Gaps = 10/326 (3%) Strand=Plus/Minus Query 794340 ACCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 ||| ||||| || |||| |||||||| ||| ||||||||||| | ||||||||| Sbjct 1222 ACCCTCGTCACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGGCATCACGCCGCGCTT 1163 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| ||||| ||||| || ||||| ||| ||||| ||||||||||| || || ||||| Sbjct 1162 CTTCAGCCAGAAGATCGCGCAGAAGGAGCCGGAGAAGAAGATGCCCTCCACCGCCGCAAA 1103 Query 794460 GCCGACGAGCCGCTC--GGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 |||| || ||||| || ||| || |||| | |||||| || |||| Sbjct 1102 CCCGAGCAGGCGCTCCTGG---AAG-CTC----GCCTCGCTTCCGATCCAGCGCACCGCC 1051 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 ||||| ||||| ||| | | || | ||| | ||| ||| | | || | |||| Sbjct 1050 CACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCTTCAGCTTC 991 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTT 794637 || | |||| ||| ||| ||||| | || | ||||||||||| ||||||||||| Sbjct 990 TCCTCGCTGTCCGTGATGTACGTGTCCAGCAGCACAGAGTAGGTCTCGGAGTGGATGTTC 931 Query 794638 TCGATGGCGATCTGGAAGCCATAAAA 794663 || || | ||||||||| || || Sbjct 930 TCCATCATCAGCTGGAAGCCGTAGAA 905 Score = 120 bits (132), Expect = 5e-21 Identities = 190/271 (70%), Gaps = 6/271 (2%) Strand=Plus/Minus Query 796149 GGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCC 796208 |||||| || || | ||| ||| ||||||||| || ||||||||| ||||||||| Sbjct 898 GGCCTCCGGCACCTTGACGTCCGACATGAAGCGCTGCGCGAGGTTCTCAATCACGATGCC 839 Query 796209 GTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG 796268 ||||||| | ||||| ||||| || |||| |||||| ||||| ||||| | || | | Sbjct 838 GTCGCTGCCAGCGAAGAAGGCAAGCACGTACTTGATGAAGTGCTGCTCGCCCTCCGTCAT 779 Query 796269 CGAGACCCAGTGGACCGT---GTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGA 796325 | ||||| |||| ||| || || |||| |||||| ||||| | | | Sbjct 778 CTTCTTCCAGT---CCGTCAGGTCATTTCCCAGATCGATCTCCTCCAGCGTCCAGATGCA 722 Query 796326 GGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAA 796385 | ||| || |||||| ||| ||| || ||||| |||| |||||||| || || Sbjct 721 GCTCTCCTGCTCCTTGTACTTCTTCCAGATGTCGTGGTACTGGATCGGGAACAGCACGAA 662 Query 796386 GCGATTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 ||| | |||||| || | |||| |||||| Sbjct 661 GCGGTAGGGGTTGTCCTGGCGCAGGGGCTCG 631 >seq753 Length=7390 Score = 134 bits (148), Expect = 2e-25 Identities = 190/267 (71%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || ||||||||| || || || || | || | ||||| ||||| ||||| | ||||| Sbjct 3870 GCCCTGGTCGACGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGCACTAAACCGTT 3929 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 ||| |||||||| ||||| | ||| || | || || | |||||| || || Sbjct 3930 CGACGTCCCGTTGGTACCCGCAATGTAACTTCCGGCGGAACGAATGTTGTGCACGTGGAA 3989 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 |||||||| ||||| | |||| ||||| ||||| | |||||||| ||||||||||| Sbjct 3990 ACCGATGCCACCGGCAGACTTGCTGATGATGGCGCATTCCTTCAGCGTATCGTAGATGCC 4049 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 |||||| |||| |||||||| | | || ||||| || | || ||| | || Sbjct 4050 CTCGATACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAACTCATCTGAGGGTTGGGGGT 4109 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGC 2073803 ||||| |||||||| ||||| || || Sbjct 4110 ACCGGCGTTGAAGAGGGTGGGGGTGGC 4136 Score = 116 bits (128), Expect = 6e-20 Identities = 365/559 (65%), Gaps = 20/559 (4%) Strand=Plus/Plus Query 2069253 GTCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGT 2069312 ||| ||||| |||| |||||| | | |||| | |||||||| || |||||||||||||| Sbjct 2472 GTCCACGGTGAACTTGATGGCATCGACGGCGGCGCGGGTGCGGAGGTAGTACATGCCGGT 2531 Query 2069313 CTTGAGGCCGCGAC-GCCACGCGTAGGCGTGCATCGACGTGA--TGGACTCGGCATTCGG 2069369 |||||||||| ||| |||| || | |||||| || |||| ||| | || | || Sbjct 2532 CTTGAGGCCG-GACTGCCAGCAGTGGAAGTGCATGGAGGTGATCTGGCCGGAGC-TGGGG 2589 Query 2069370 GACGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGC 2069429 ||| || | |||| || | ||||| |||||| | ||| |||||| |||| | Sbjct 2590 GACTCCA-GGAAGAGATTCATGGACTGAGACTGGTCAATATACTTGGCGCGGGCGGCGGA 2648 Query 2069430 CATGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGATG 2069489 |||||| || | ||| | | | |||||| ||||| | | || |||| |||| Sbjct 2649 CATGTCAATCAGCTTGCGCTGCGGAATCTCCCAAACGGTGCGGTAGAGCTCCTTCAGATC 2708 Query 2069490 CGGCGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTC 2069549 ||| | ||||| | | | | || ||||| | | ||||| || Sbjct 2709 ATCCGGGATACCGTCG------ATTCGCAGGACGGAGCCGTTGAAGGTGATGATTTCGTT 2762 Query 2069550 GCGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGAC 2069609 || | | ||||||| || || || || | | || ||| |||| ||| || Sbjct 2763 ACGCAGCTTCTCATTCCACAGACCACGGGCGATGAGGTCCTTGACAAGGTATTTGTTCAC 2822 Query 2069610 CACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCA 2069669 || | || || || ||| ||||| ||| |||||| | |||| | |||| | Sbjct 2823 AACCGGGAACTCCCCACTCAGCGTACGGCGGACGTAAATGTTGGTGGTGAAGGGCTCGAA 2882 Query 2069670 CGCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAG 2069729 ||| |||| || || || || || | ||| |||||||| ||||||| | ||| Sbjct 2883 GCACTCATTGTTACCGAGAATTTGACTGGTGGAGGCGGTGGGCATCGGCGCCACCAACAG 2942 Query 2069730 CGAGTTGCGCA----GGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGC 2069785 ||||| |||| || ||| || ||| || || |||||||||||||| ||||| Sbjct 2943 AGAGTTTCGCATACCGGTCGTCTTGACGC----GCTCCTTCAGGGCGTCCCAGTTCCAGC 2998 Query 2069786 GGCCGCTCTCGTGCGTCTT 2069804 |||||||| | || |||| Sbjct 2999 GGCCGCTCACCGGCTTCTT 3017 Score = 102 bits (112), Expect = 1e-15 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| ||| |||| |||||||| || || ||||| |||||||| ||| ||| |||| Sbjct 3737 TCCAGAGGGCGTAGAAGAGATCACGGGCACGGTTGTCCTCCTTACCGGTGTTACGCTTCA 3796 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 || || | || | | |||||||||||| ||||| |||||| ||||||||| |||| Sbjct 3797 GGAGAAGGAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCT 3856 Query 2071997 TGCGCTTGCCGCCGCC 2072012 | | ||| |||||||| Sbjct 3857 TTCTCTTACCGCCGCC 3872 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915400403116367