Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq4492 122 6e-23 seq153 120 2e-22 seq5385 116 2e-21 seq7439 89.7 3e-13 seq799 86.0 4e-12 >seq4492 Length=1347 Score = 122 bits (134), Expect = 6e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 146 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCT 205 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 206 TCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 265 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || ||| |||||| || | || |||||| Sbjct 266 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 325 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || || ||||| Sbjct 326 TTGCCGGTGAGGGTCTTCACGAAAATTTGCAT 357 >seq153 Length=16899 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| |||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 9629 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCC 9570 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || |||||||| | || | ||||||||||| Sbjct 9569 TCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 9510 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || ||| |||||| || | || |||||| Sbjct 9509 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 9450 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATGATA 34981 || || || |||||||| || ||||| |||||| || Sbjct 9449 TTGCCGGTAAGGGTCTTCACGAAGATTTGCATGGTA 9414 >seq5385 Length=1056 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 883 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCT 824 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 823 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 764 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || ||| |||||| || | || |||||| Sbjct 763 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 704 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||||||||| || || || ||||| Sbjct 703 TTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 198 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCT 139 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 138 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 79 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||| | || | || ||| |||||| || | || |||||| Sbjct 78 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 19 Query 34946 TTTCCCGTGAGGGTCTT 34962 || || ||||||||||| Sbjct 18 TTGCCGGTGAGGGTCTT 2 >seq7439 Length=588 Score = 89.7 bits (98), Expect = 3e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | |||| ||||||||| ||||| ||||| | ||| |||| | || Sbjct 178 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCT 119 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || || |||||||| | || | ||||||||||| Sbjct 118 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 60 >seq799 Length=7053 Score = 86.0 bits (94), Expect = 4e-12 Identities = 91/119 (76%), Gaps = 1/119 (1%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| ||||| ||| ||||||||| ||||| ||||||| ||| | || | || Sbjct 133 AGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTCGGCCC-TCC 75 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| || ||||||||||| || |||||||| | || | ||||||||||| Sbjct 74 TCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325661231512907