Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq753 205 9e-48 >seq753 Length=7390 Score = 205 bits (226), Expect = 9e-48 Identities = 855/1332 (64%), Gaps = 38/1332 (3%) Strand=Plus/Plus Query 146905 AACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGCTCAAAAGACTCA 146964 ||||| || |||| ||| | || || | ||| | ||||| ||||| || ||||| Sbjct 2830 AACTCCCCACTCAGCGTACGGCGGACGTAAATGTTGGTGGTGAAGGGCTCGAAGCACTCA 2889 Query 146965 TTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACCAACAATGAATTT 147024 || || || | ||||| |||| ||||| ||||| ||||||||||| || ||| Sbjct 2890 TTGTTACCGAGAATTTGACTGGTGGAGGCGGTGGGCATCGGCGCCACCAACAGAGAGTTT 2949 Query 147025 CGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCACAT--CGACGAG- 147081 |||| |||| || || | ||||||| | | ||||| ||| || | Sbjct 2950 CGCATACCGGTCGTCTTGACGCGCTCCTTCAGGGCGTCCCAGTTCCAGCGGCCGCTCACC 3009 Query 147082 GGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACTGCCAGCGAAC 147141 ||| || | ||| | ||| |||| || | ||| | |||||| ||||| | || Sbjct 3010 GGCTTCTTCTCCCAGAGATCGAACTGCAGAAGGCCTTGGGAGGCGGGGCTGCCGGGAAAG 3069 Query 147142 GTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCGCTCCATAGTAT 147201 || || ||| || | |||||| || | | ||| | ||| | ||||| Sbjct 3070 GTTTCATACGGTCCCTCCACCGCCGCCAAGTCCACGGAGGACTCCACCGCGGCGTAGTAG 3129 Query 147202 ATGGTTTCGGCGATTTGTTTGTTTAGGACGGT-CGCTTCTTCGCTCTCGTAAGGCATACG 147260 ||||| ||| ||| | | ||| | || | ||| || |||||| | | || | || Sbjct 3130 ATGGTCTCGAAGATGTCCTCGTTCAAC-CGCTGCGCCTCCTCGCTCGTGAAGGGGAGGCG 3188 Query 147261 CAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTCGATGCTTTTC 147320 || || | |||||| || ||||| ||||| | |||| ||||| || || | || | Sbjct 3189 AAGGAGAATAAAGGCGTCCGCCAACCCCTGCACGCCGAGGCCGACCGGGCGGT--TTCGC 3246 Query 147321 --GTTGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAATCTTGTTGAGG 147378 ||| ||||| | || | | | ||| |||| |||||| ||||| | |||||| Sbjct 3247 ATGTTACTGCGTCTGGCCGTTTCCACGGGGTAGTAGTTGCGGTCAATGACTCGGTTGAGA 3306 Query 147379 TTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATA-AGTCCCGTCTTC 147437 || || | || || | | ||| |||| | ||| | | ||| ||| Sbjct 3307 TTGTAGGTCACGTCCTTGGTGACCTCGTAGAGCTTCTGGTGGTCAAAGACGCCCTTCTCG 3366 Query 147438 GACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCGTCTCTTCGGC 147497 | | ||| | || | |||||| || |||| ||||| || |||||||| || Sbjct 3367 GTGTCC-ACGAAGCGGGGGAGGGCGATGGAGGCCAAGTTGCACACCGCCGTCTCGTCCTT 3425 Query 147498 GTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTATGACTCCCAAATTTTG 147557 | | |||||| || || |||| |||||||||| ||| || ||| |||| ||||| Sbjct 3426 GCTGGTGTACTCCATAATCTCGGTGCACAGGTTGGAGCACTTGATGGTGCCCAGATTTTT 3485 Query 147558 CTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGAC 147617 ||| ||| || || ||||| | ||| ||| | |||||| | || | |||||||| || Sbjct 3486 CTGGTTGGACTTTCGGTTGCAAGAGTCCTTGTACAGCATGAAAGGGACACCGGTCTCCAC 3545 Query 147618 TTGCGTTTCAACGATA---AACCTATGCAGGTCCTGCGCTCGCACCCGCTGCCGATAGC- 147673 || | || | || |||| ||| || ||||| | | ||| ||| | Sbjct 3546 CTGGGACTCCAGAATGGCGAACCA---CAGCTCTTGCGCGGCGAT--GGTGCGGATGCCC 3600 Query 147674 -GGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGCAATCGGCA 147732 | |||| | |||||| ||||||| | ||||||||| ||||||| ||| ||| Sbjct 3601 AGACCCTGTCTCTCGTACTCCTCGTACTTCTTCTCAAACTCCTCGCCGTGGCAGTCGCTC 3660 Query 147733 AGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTCCGCGTTAACGCGTCGC 147792 ||||||| || ||| || |||||||| |||| || | || || || || | Sbjct 3661 AGGCCGGTGCAGATATGGGGGTCCATCAGCGTCCACTTGCCCTCGCTCTTGACACGCTTC 3720 Query 147793 ATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGCAATCCTCGGCG 147852 || || ||||| || | ||| || ||||| | ||||| || || | ||||| Sbjct 3721 ATGAAGAGATCGGGGATCCAGAGGGCGTAGAAGAGATCACGGGCACGGTTGTCCTCCTTA 3780 Query 147853 CCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAG 147912 || |||| || |||| ||| | | | ||||||||||||||||| || | |||| Sbjct 3781 CCGGTGTTACGCTTCAGGAGAAGGAACTCAAAAATGTCGGCGTGCCAGGGCTCGAGGTAG 3840 Query 147913 ACGGCCAGCGCACCTTTACGCTT---TCCGCCCTGGTCGACATGGCGCACCATGTTGTTA 147969 ||||| | ||||| || | ||| |||||||||||||| | || | | || || Sbjct 3841 ACGGCAAAGGCACCCTTTCTCTTACCGCCGCCCTGGTCGACGTAACGGGCGGTATTATTC 3900 Query 147970 AACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGT----GGAATTGATCTT 148025 ||||||| | ||| || | | ||| ||| || |||||||| | ||| | ||| Sbjct 3901 CACACGCGAAGCATCGGCACTAAACCGTTCGACGTCCCGTTGGTACCCGCAATGTAACTT 3960 Query 148026 GCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCCGCCGTACTT--TGAT 148083 ||| || || | | |||||||| | || ||||| ||| | |||| |||| Sbjct 3961 ----CCGGCGGAACGAATGTTGTGCACGTGGAAACCGATGCCACCGGCAGACTTGCTGAT 4016 Query 148084 -ATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCGTCGATGCTGTCGTTTTTGACGCC 148142 ||| ||||| || || || ||||||||| ||||| ||||||| || | | | Sbjct 4017 GATG---GCGCATTCCTTCAGCGTATCGTAGATGCCCTCGATACTGTCGTCCTTCATGGC 4073 Query 148143 AAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACT 148202 || ||| || || |||| ||| || || | | || || || ||| |||||||| | Sbjct 4074 AACCAAGAAGCAAGAACTCATCTGAGGGTTGGGGGTACCGGCGTTGAAGAGGGTGGGGGT 4133 Query 148203 CGCGTGCGTAAA 148214 ||||| || || Sbjct 4134 GGCGTGGGTGAA 4145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476563818889080