Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3286 223 5e-52 seq753 147 3e-29 >seq3286 Length=1922 Score = 223 bits (246), Expect = 5e-52 Identities = 403/581 (69%), Gaps = 15/581 (3%) Strand=Plus/Plus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 |||||| |||| | || ||||| ||||||| || |||||||| |||| ||||| Sbjct 631 CGAGCCCCTGCGCCAGGACAACCCCTACCGCTTCGTGCTGTTCCCGATCCAGTACCACGA 690 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 || ||| | | |||| || || ||| || | | ||||| |||||| |||| | Sbjct 691 CATCTGGAAGAAGTAC-AAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGATC 749 Query 1455835 TCGGCGCCGAC---ACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCA 1455891 | || ||| |||| ||||| | | ||| || | ||||| || ||||||| Sbjct 750 TGGGAAATGACCTGACGG---ACTGGAAGAAGATGACGGAGGGCGAGCAGCACTTCATCA 806 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 || |||| || ||||| || ||| | |||||| ||||||||| |||||||| || Sbjct 807 AGTACGTGCTTGCCTTCTT-CGCTGGCAGCGACGGCATCGTGATTGAGAACCTCGCGCAG 865 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 ||||| ||| || ||| | |||| ||||| ||| ||| ||||| |||||| | Sbjct 866 CGCTTCATGTCGGACGTCAAGGTGCCGGAGGCCCGTGCGTTCTACGGCTTCCAGCTGATG 925 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || |||||||| | ||| | ||||| ||| ||| |||| Sbjct 926 ATGGAGAACATCCACTCCGAGACCTACTCTGTGCTGCTGGACACGTACATCACGGACAGC 985 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | |||||| | || | | ||| ||| | ||| | |||| | ||| ||||| Sbjct 986 GAGGAGAAGCTGAAGCTGCTGCACGCGATCCAGACGATCCCGTGCATCCAGAAGAAGGCG 1045 Query 1456132 GACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCG 1456191 || |||||| || |||||| | |||| ||| ||| ||||| || ||| Sbjct 1046 GAGTGGGCGGTGCGCTGGATCGGAAGCGAGG----CGA-GCTTCCAGGAGCGCCTGCTCG 1100 Query 1456192 GCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCA 1456250 | ||||| || || ||||||||||| ||||| ||| |||||||| ||||| ||||| | Sbjct 1101 GGTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCGATCTTCTGGCTGA 1160 Query 1456251 AGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGA 1456291 ||||||||||| | |||||||| | | ||| |||||||| Sbjct 1161 AGAAGCGCGGCGTGATGCCCGG-CCTGACCTTCAGCAACGA 1200 Score = 132 bits (146), Expect = 7e-25 Identities = 213/300 (71%), Gaps = 12/300 (4%) Strand=Plus/Plus Query 1456448 GGTTTGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAA---CAAGCCGTCG 1456504 ||| ||||| |||||||| || ||||| |||| | | | |||| ||||| |||| Sbjct 1220 GGTCTGCACACGGACTTTGCGTGCCTGCTGTACAACAGCCACATCAAGAACAAGCTGTCG 1279 Query 1456505 ACCGA---CGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTC 1456561 ||| ||||| || |||||| ||| ||||| || |||||||| ||||| || Sbjct 1280 CGCGAGCGCGTGCTGAAC---ATCATCACCGATGCCGTGGACATCGAGAAGGAGTTCATC 1336 Query 1456562 AGCGAGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACAT 1456621 ||||||| || || ||| || || || |||||| | | | ||| |||||||||| Sbjct 1337 TGCGAGTCCCTCCCCGTGCGCCTGATTGGTATGAACTCGGA-GATGATGAGCCAGTACAT 1395 Query 1456622 TGAATTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG 1456681 ||| || || || ||||| ||||| | | || ||| | || |||||||||| || Sbjct 1396 TGAGTTC-GTGGCGGACCGTCTGCTGGTCTCCCTTGGC-GAGGCGAAGCACTACAACGCG 1453 Query 1456682 GCCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 | ||||| ||| | |||||| ||||||| ||| |||||||||||||| |||||| Sbjct 1454 ACGAACCCCTTCGACTTCATGGAGATGATCTCCCTCCCTGGCAAGACCAACTTCTTCGAG 1513 >seq753 Length=7390 Score = 147 bits (162), Expect = 3e-29 Identities = 198/276 (72%), Gaps = 0/276 (0%) Strand=Plus/Minus Query 259910 TTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCG 259969 |||||| || || ||||| ||||| || ||||| || || ||| |||| || Sbjct 4145 TTCACCCACGCCACCCCCACCCTCTTCAACGCCGGTACCCCCAACCCTCAGATGAGTTCT 4086 Query 259970 TGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAG 260029 ||||| || | | |||||||| ||| |||||||||||||| || ||||| ||| | Sbjct 4085 TGCTTCTTGGTTGCCATGAAGGACGACAGTATCGAGGGCATCTACGATACGCTGAAGGAA 4026 Query 260030 TGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCC 260089 ||||| ||||| |||| | ||||| ||||||||||| || ||||| | || || Sbjct 4025 TGCGCCATCATCAGCAAGTCTGCCGGTGGCATCGGTTTCCACGTGCACAACATTCGTTCC 3966 Query 260090 GCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGC 260149 || || ||| | ||||| |||||||| ||| ||||| | ||||| ||||||||| Sbjct 3965 GCCGGAAGTTACATTGCGGGTACCAACGGGACGTCGAACGGTTTAGTGCCGATGCTTCGC 3906 Query 260150 GTTTTTAACGACACGGCGCGCTACGTCGACCAGTGC 260185 || | || | || || || |||||||||||| || Sbjct 3905 GTGTGGAATAATACCGCCCGTTACGTCGACCAGGGC 3870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177044118532386