Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq5385 93.3 4e-14 seq153 86.0 5e-12 >seq5385 Length=1056 Score = 93.3 bits (102), Expect = 4e-14 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| | ||||||||||| |||||| Sbjct 868 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCG 809 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||| ||||| || ||||| || | ||||| || || ||||| ||| Sbjct 808 GCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTC 749 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || | || | || || || || || Sbjct 748 ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTC 689 Query 27231 TTCACAAAGATTTGCATAGCT 27251 ||||| || |||||||||||| Sbjct 688 TTCACGAAAATTTGCATAGCT 668 >seq153 Length=16899 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || || || ||||||||| | | |||| | || |||||||| |||||| Sbjct 9614 GTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCG 9555 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | ||||| ||||| || ||||| || | ||||| || || ||||| ||| Sbjct 9554 GCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTAGCCTTC 9495 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| ||| || || || || | || | ||||| || || || Sbjct 9494 ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTC 9435 Query 27231 TTCACAAAGATTTGCAT 27247 ||||| ||||||||||| Sbjct 9434 TTCACGAAGATTTGCAT 9418 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424893212303736