Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq753 199 5e-46 seq3286 187 3e-42 >seq753 Length=7390 Score = 199 bits (220), Expect = 5e-46 Identities = 600/913 (66%), Gaps = 19/913 (2%) Strand=Plus/Plus Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 || || ||||| ||| | ||||| ||||||||||||||||| | ||||| |||||| Sbjct 2857 TAAATGTTGGTGGTGAAGGGCTCGAAGCACTCATTGTTACCGAGAATTTGACTGGTGGAG 2916 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || |||||||| || |||| | || ||| || | ||| | | | | ||| ||| Sbjct 2917 GCGGTGGGCATCGGCGCCACCAACAGAGAGTTTCGCATACCGGTCGTCTTGACGCGCTCC 2976 Query 118302 TTGAGAGCGTCCCAGTCGTAGTTG-AGCT--TTGTCTCCCCCTGCCACATATCAAACTGG 118358 || || |||||||||| || | ||| | || | || ||| | ||| ||||| Sbjct 2977 TTCAGGGCGTCCCAGTTCCAGCGGCCGCTCACCGGCTTCTTCTCCCAGAGATCGAACTGC 3036 Query 118359 AGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCC 118418 || | |||||||| || || || ||| || ||||| || ||||| ||| ||||| Sbjct 3037 AGAAGGCCTTGGGAGGCGGGGCTGCCGGGAAAGGTTTCATACGGTCCCTCCACCGCCGCC 3096 Query 118419 AATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTC 118475 || | ||||| | ||| | || |||| || || || || || ||| | ||| Sbjct 3097 AAGTCCACGGAG---GACTCCACCGCGGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTC 3153 Query 118476 ATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGA 118535 | || ||||| ||| || | ||| || | |||||| | ||||| | Sbjct 3154 AACCGCTGCGCCTCCTCGCTCGTGAAGGGGAGGCGAAGGAGAATAAAGGCGTCCGCCAAC 3213 Query 118536 CCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA-GACTTCCGAGCGGTCTCCAC 118594 || || || |||||||| | ||||| | || ||| ||| | || | || || ||||| Sbjct 3214 CCCTGCACGCCGAGGCCGACCGGGCGGTTTCGCATGTTACTGCGTCTG-GCCGTTTCCAC 3272 Query 118595 GGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 118654 ||| || | || | || || || | || ||||| | ||| || |||| |||| || Sbjct 3273 GGGGTAGTAGTTGCGGTCAATGACTCGGTTGAGATTGTAGGTCACGTCCTTGGTGACCTC 3332 Query 118655 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 118714 | ||||| | || ||||| || |||| | || | || |||||||| Sbjct 3333 GTAGAGCTTCTGGTGGTCAAAGACGCCCTTCTCGGTGTCCACGAAGCGGGGGAGGGCGAT 3392 Query 118715 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCA 118774 || |||| || ||||| | ||||| ||||| |||||||| ||||| || ||||| Sbjct 3393 GGAGGCCAAGTTGCACACCGCCGTCTCGTCCTTGCTGGTGTACTCCATAATCTCGGTGCA 3452 Query 118775 CAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATC 118834 || ||| || | ||| |||||||||| || || || || |||||| ||| || | || Sbjct 3453 CAGGTTGGAGCACTTGATGGTGCCCAGATTTTTCTGGTTGGACTTTCGGTTGCAAGAGTC 3512 Query 118835 CTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGAC 118894 |||||| |||||| | || || |||||| ||||||| ||||| || ||| | Sbjct 3513 CTTGTACAGCATGAAAGGGACACCGGTCTCCACCTGGGACTCCAGAATGGCGAACCACAG 3572 Query 118895 ATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGC 118954 || || | | ||| | || | | |||| | |||||||| ||| Sbjct 3573 CTCTTGCGCGGCGATGGTGCGGATGCCCAGACCCTGTCTCTCGTACTCCTCGTACTTCTT 3632 Query 118955 TTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGC-CTTATCTGGGCAGAAGAG 119011 |||||||| || || | | | || || ||| ||||| ||| ||| | || Sbjct 3633 CTCAAACTCCTCGCCGTGGCAGTCGCTCAG-GCC--GGTGCAGATATGGGGGTCCATCAG 3689 Query 119012 AGACCA-TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCG 119070 | ||| ||| || | || || || |||||||||||||| || ||||||||||| || Sbjct 3690 CGTCCACTTGCCCTCGCT-CTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGT 3748 Query 119071 AGAAGAGATCCCG 119083 |||||||||| || Sbjct 3749 AGAAGAGATCACG 3761 >seq3286 Length=1922 Score = 187 bits (206), Expect = 3e-42 Identities = 362/527 (69%), Gaps = 12/527 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||||| ||||||||||||||| ||||| || | | ||| ||||||| Sbjct 1530 TAGTCACCAACCTTCTTCTCGAAGAAGTTGGTCTTGCCAGGGAGGGAGATCATCTCCATG 1471 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCT--GGCACTCCAATCTGTTTGAGGAGAC 129845 || || || |||||| | | ||| | |||| | | | |||| || |||| Sbjct 1470 AAGTCGAAGGGGTTCGTCGCGTTGTAG--TGCTTCGCCTCGCCAAGGGAGACCAGCAGAC 1413 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | |||| ||| |||||||||||| |||| |||| ||||||||||| || ||| Sbjct 1412 GGTCCGCCACGAACTCAATGTACTGGCTCATCATCTCCGAGTTCATACCAATCAGGCGCA 1353 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 ||||| | || |||||||| ||||||| |||||||| || || | |||| Sbjct 1352 CGGGGAGGGACTCGCAGATGAACTCCTTCTCGATGTCCACGGCATCGGTGATGATGTTCA 1293 Query 129966 GAATGGTCTC-CGTGCCAGGTC--TATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAAC 130021 | | | ||| || | ||| | | ||| | ||| | || |||| |||| Sbjct 1292 GCACGCGCTCGCGCGACAGCTTGTTCTTGATGTGGCTGTTGTACAGCAGGCACG-CAAAG 1234 Query 130022 TCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 130081 ||| ||| ||||||||||||||||| || || || || |||| ||| || ||||| Sbjct 1233 TCCGTGTGCAGACCCTCGTCACGGGAAATCAGCTCGTTGCTGAAGGTCAGGCCGGGCATC 1174 Query 130082 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 130141 | || |||||||||| |||||| ||||| || || ||||| ||||||||||| |||||| Sbjct 1173 ACGCCGCGCTTCTTCAGCCAGAAGATCGCGCAGAAGGAGCCGGAGAAGAAGATGCCCTCC 1114 Query 130142 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACTTC 130201 || ||| ||| | | || |||| | | ||| | || | | | ||| | Sbjct 1113 ACCGCCGCAAACCCGAGCAGGCGCT---CCTGGAAGCTCGCCTCGCTTCCGATCCAGCGC 1057 Query 130202 ATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 | |||||||| |||||| |||| ||| ||||||| ||||||||||| Sbjct 1056 ACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 1010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618373719810680