Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq753 210 3e-49 seq3286 118 1e-21 seq3134 82.4 9e-11 seq1411 82.4 9e-11 >seq753 Length=7390 Score = 210 bits (232), Expect = 3e-49 Identities = 662/1010 (66%), Gaps = 17/1010 (2%) Strand=Plus/Minus Query 104598 GAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTG 104657 ||||||| | | || ||||| || ||||| |||||||| || || | ||||||||| Sbjct 3859 GAAAGGGTGCCTTTGCCGTCTACCTCGAGCCCTGGCACGCCGACATTTTTGAGTTCCTTC 3800 Query 104658 AGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCT 104717 || | ||| ||| | ||||| || ||| |||||||||| ||| |||| Sbjct 3799 TCCTGAAGCGTAACACCGGTAAGGAGGACAACCGTGCCCGTGATCTCTTCTACGCCCTCT 3740 Query 104718 GGATTCCAGATCTCTTCATGAAGAGAGTTGAG-GAGAGTGGCAATTGGTCTCTCTTTTGT 104776 |||| || ||||||||||||||| | || || | ||| ||||| ||| | || | Sbjct 3739 GGATCCCCGATCTCTTCATGAAGCGTGTCAAGAGCGAG-GGCAAGTGGACGCTGATGGAC 3681 Query 104777 CCAGACAAG-GCACCTGGTCTCTCCGA-TGCCGTGGGTGAGGAGTTTGAAGCCCTTTACA 104834 || | | ||||| || || ||| |||| || ||||||||||| ||| Sbjct 3680 CCCCATATCTGCACC-GGCCTGAGCGACTGCCACGGC-GAGGAGTTTGAGAAGAAGTACG 3623 Query 104835 CAAAGTACGAGGAAGAAGGTC-GGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAA 104893 |||||||| | | |||| |||| | || | ||| || || ||||| Sbjct 3622 AGGAGTACGAGAGACAGGGTCTGGGCATCCGCACCATCGCC-GCGCAAGAGCTGTGGTTC 3564 Query 104894 GCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGT 104953 || ||||| |||| || ||||| ||| || | |||||| ||||| ||| | || Sbjct 3563 GCCATTCTGGAGTCCCAGGTGGAGACCGGTGTCCCTTTCATGCTGTACAAGGACTCTTGC 3504 Query 104954 AACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAA 105013 |||| |||| || || || ||| |||| |||||| | ||||| || || || || Sbjct 3503 AACCGAAAGTCCAACCAGAAAAATCTGGGCACCATCAAGTGCTCCAACCTGTGCACCGAG 3444 Query 105014 ATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTC 105073 || |||| | || ||| || |||||||| ||||| ||| | || || ||||| ||| Sbjct 3443 ATTATGGAGTACACCAGCAAGGACGAGACGGCGGTGTGCAACTTGGCCTCCATCGCCCTC 3384 Query 105074 CCCAAGTATGTGGATCCAGAGACAAAGACAT--TTGATTATGAAAAACTCCACGAAGTTA 105131 ||| | ||||| | |||| | | | | |||| | | || ||| |||| || | Sbjct 3383 CCCCGCTTCGTGGACACCGAGA--AGGGCGTCTTTGACCACCAGAAGCTCTACGAGGTCA 3326 Query 105132 CGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGA 105191 | || || ||| | || || ||| |||| ||||| | || | |||||||| || | Sbjct 3325 CCAAGGACGTGACCTACAATCTCAACCGAGTCATTGACCGCAACTACTACCCCGTGGAAA 3266 Query 105192 CTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGG 105251 | || | ||| ||| || |||| || | || ||||| || ||||| | |||| Sbjct 3265 CGGCCAGACGCAGTAACATGCGAAACCGCCCGGTCGGCCTCGGCGTGCAGGGGTTGGCGG 3206 Query 105252 ATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGC 105311 | | || ||||| ||||| | | || ||| || ||| || | || | | Sbjct 3205 ACGCCTTTATTCTCCTTCGCCTCCCCTTCACGAGCGAGGAGGCGCAGCGGTTGAACGAGG 3146 Query 105312 GCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTG 105371 ||| || |||||||| || ||||||| | ||| | || ||||| | ||| | Sbjct 3145 ACATCTTCGAGACCATCTACTACGCCGCGGTGGAGTCCTCCGTGGACTTGGCGGCGGTGG 3086 Query 105372 ATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATA 105431 | || || |||||||||||| || || || || ||||| | || || || ||| Sbjct 3085 AGGGACCGTATGAAACCTTTCCCGGCAGCCCCGCCTCCCAAGGCCTTCTGCAGTTCGATC 3026 Query 105432 TGTGGGAAGGTGAGACC---AAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATC 105487 | |||| || || || ||| | || ||||||| || || ||||| ||| || Sbjct 3025 TCTGGG-AGAAGAAGCCGGTGAGCGGCCGCTGGAACTGGGACGCCCTGAAGGAGCGCGTC 2967 Query 105488 AAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCA 105547 ||| || ||| | || ||| ||| | |||| || ||||| || ||||||||| Sbjct 2966 AAGACGACCGGTATGCGAAACTCTCTGTTGGTGGCGCCGATGCCCACCGCCTCCACCAGT 2907 Query 105548 CAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 ||||| | ||||| ||||| ||||| || |||| ||| || ||||| || Sbjct 2906 CAAATTCTCGGTAACAATGAGTGCTTCGAGCCCTTCACCACCAACATTTA 2857 >seq3286 Length=1922 Score = 118 bits (130), Expect = 1e-21 Identities = 194/279 (70%), Gaps = 3/279 (1%) Strand=Plus/Plus Query 94678 GACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTT 94737 |||| ||| || | ||| | | |||||| | |||| | | || ||||| || | Sbjct 965 GACACGTACATCACGGACAGCGAGGAGAAGCTGAAGCTGCTGCACGCGATCCAGACGATC 1024 Query 94738 CCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCC 94797 ||||| || || ||||| ||||| ||||| || ||| | | | || || | | Sbjct 1025 CCGTGCATCCAGAAGAAGGCGGAGTGGGCGGTGCGCTGGATCGGAAGCGAGGCGAG---C 1081 Query 94798 TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTC 94857 || ||||| || ||| |||||| || ||||| ||||||||||| || |||||| Sbjct 1082 TTCCAGGAGCGCCTGCTCGGGTTTGCGGCGGTGGAGGGCATCTTCTTCTCCGGCTCCTTC 1141 Query 94858 TGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAG 94917 ||||| || | ||||| |||||||| || | ||||| || || |||| ||||||| Sbjct 1142 TGCGCGATCTTCTGGCTGAAGAAGCGCGGCGTGATGCCCGGCCTGACCTTCAGCAACGAG 1201 Query 94918 CTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 94956 || || || ||||||||||| || ||| || |||||| Sbjct 1202 CTGATTTCCCGTGACGAGGGTCTGCACACGGACTTTGCG 1240 >seq3134 Length=2018 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 169139 GGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCG 169198 ||||||||| |||| | ||| |||| ||||| || ||||||||||| ||||||| ||| Sbjct 1768 GGCCAGAAGAAGTGCACCATGTTGATGATGAGGCCTTTGATGTGGGAGCCGTCGTGATCC 1709 Query 169199 GCATCCGTCATGATCATGAGACGACCATACCGAAG 169233 ||| | |||||||||||| | || || ||||| Sbjct 1708 TGATCGGACATGATCATGAGGTGGCCGTATCGAAG 1674 >seq1411 Length=4569 Score = 82.4 bits (90), Expect = 9e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 169139 GGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGAACCGTCGTTATCG 169198 ||||||||| |||| | ||| |||| ||||| || ||||||||||| ||||||| ||| Sbjct 3790 GGCCAGAAGAAGTGCACCATGTTGATGATGAGGCCTTTGATGTGGGAGCCGTCGTGATCC 3731 Query 169199 GCATCCGTCATGATCATGAGACGACCATACCGAAG 169233 ||| | |||||||||||| | || || ||||| Sbjct 3730 TGATCGGACATGATCATGAGGTGGCCGTATCGAAG 3696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583202816585720