Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq186 154 4e-32 seq699 127 6e-24 seq2946 109 2e-18 >seq186 Length=15591 Score = 154 bits (170), Expect = 4e-32 Identities = 458/704 (65%), Gaps = 7/704 (1%) Strand=Plus/Minus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 |||| | || || ||||| || || || || || || || | || | | ||||| | Sbjct 4562 CGCTGTCGGTATTGATTTGGGCACGACCTACTCCTGCGTCGGCGTCTTCAAGAATGACCA 4503 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 || || || || || || || || |||||| | || || || || ||||| || || || Sbjct 4502 GGTGGAGATTATCGCCAACGACCAGGGTAACCGTACCACCCCCTCCTACGTCGCCTTCAC 4443 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 ||| || |||||| || | |||||| | || || ||||| | || || || || Sbjct 4442 CGAGACGGAGCGTCTGGTCGGTGATGCCGCCAAGAATCAGGTGGCCATGAACCCCCTCAA 4383 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA--CAA 349435 || | |||||||| ||||| | ||||| | | || |||| | || || Sbjct 4382 CACCATCTTTGATGCCAAGCGCATGATTGGCCGCAAGTTCGATGACCC--CGACTTGCAG 4325 Query 349436 TCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATT 349495 || || | || || | || || | || || || ||| || || | | Sbjct 4324 TCCGACATGAAGCACTGGCCCTTCAAGGTGACGGTGAAGGAGGGT---AAGCCGGTGGTG 4268 Query 349496 GAGGTTGAATATAAAGGTGAACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTT 349555 | ||| || || | || || || || || | ||||| ||||| || | ||||| Sbjct 4267 GTGGTGGACTACCAGGGCGACCAGAAGTCCTTCTCCCCCGAGGAAATCTCTGCCATGGTG 4208 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | | || |||||||| | || ||||| || | || || | || || | || || Sbjct 4207 CTCGGCAAGATGAAGGAGGTGGCGGAAGCCTACTGCGGCGAGTCGGTCACCAAGGCCGTC 4148 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || || || || ||||| || || || | |||||| || || || || || || | Sbjct 4147 ATCACCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCCGGTACA 4088 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 ||||| || ||| | || || | || ||||| || ||||| || || || ||||| || Sbjct 4087 ATTGCCGGCTTAGAGGTGCTCCGTATCATTAACGAGCCCACCGCGGCCGCTATTGCCTAC 4028 Query 349736 GGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGT 349795 || | || || | || || || || ||| | || ||||| ||| | || || ||| Sbjct 4027 GGTATCGACAAGAAGACCAACGGCGAGAAGAATGTGCTCATTTTCGATCTCGGCGGCGGT 3968 Query 349796 ACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCT 349855 || || ||||| | || || || |||| || || || ||| || || || || ||| Sbjct 3967 ACGTTCGATGTGACCCTTCTGACCATTGACGACGGCATCTTTACCGTCAAGGCCACCGCT 3908 Query 349856 GGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 |||||||| ||||| ||||| || || |||||||| |||||||| Sbjct 3907 GGTGATACCCATCTCGGTGGTGAGGACTTTGATAACCGTCTCGT 3864 >seq699 Length=7719 Score = 127 bits (140), Expect = 6e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 349198 CGCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCG 349257 |||| | || || ||||| ||||| || || |||||||| | |||||||| || || || Sbjct 5482 CGCTGTTGGTATTGATTTGGGTACGACCTACTCTTGTGTGGGCGTTTGGCAGAACGAACG 5541 Query 349258 TGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTAC 349317 ||| || || ||||| || |||||||||||| | || || || || ||||| || || || Sbjct 5542 TGTGGAGATCATTGCTAACGATCAAGGTAACCGCACGACCCCCTCCTACGTCGCGTTCAC 5601 Query 349318 CGAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAA 349377 ||| | |||||| |||| || ||| | || || || |||| || || || | || Sbjct 5602 CGACTCCGAGCGTCTGATCGGAGATGCCGCCAAGAACCAAGTCGCCATGAACCCCCACAA 5661 Query 349378 TACGGTTTTTGATGCTAAGCGACTTATTGG 349407 || || |||||||| ||||| || || || Sbjct 5662 CACCGTCTTTGATGCGAAGCGCCTGATCGG 5691 >seq2946 Length=2152 Score = 109 bits (120), Expect = 2e-18 Identities = 189/272 (69%), Gaps = 6/272 (2%) Strand=Plus/Minus Query 349619 ACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATT 349678 ||||| || || || || || |||||||||||| | || || || |||| | ||| Sbjct 1194 ACTGTGCCCGCGTACTTCAACGATGCCCAGCGTCAGTCCACCAAGGACTCTGGTACGATT 1135 Query 349679 GCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGG 349738 || || | ||||| | | || ||||| || |||||||| || || || || || || Sbjct 1134 GCCGGCCTCAATGTGGTTCGTATTATTAACGAGCCCACTGCCGCCGCTATCGCCTACGGT 1075 Query 349739 CTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACT 349798 || || | || | | | || || || ||||| | || ||| | ||||||||||| Sbjct 1074 CT-GA-ACAAGGCGGGC----GAGAAGAACATTCTCGTCTTCGATCTCGGTGGTGGTACG 1021 Query 349799 TTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGT 349858 |||||||| || || || || |||| || || | |||||||| || || ||| Sbjct 1020 TTTGATGTGTCTCTTCTCACCATTGACGAAGGTTTCTTTGAAGTGGTGGCCACCAACGGT 961 Query 349859 GATACACATCTTGGTGGAGAAGATTTTGATAA 349890 ||||| ||||| ||||| || || |||||||| Sbjct 960 GATACCCATCTCGGTGGTGAGGACTTTGATAA 929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515099998891259