Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq753 210 2e-49 seq1511 87.8 2e-12 >seq753 Length=7390 Score = 210 bits (232), Expect = 2e-49 Identities = 375/534 (70%), Gaps = 20/534 (4%) Strand=Plus/Minus Query 53270 TACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATGTCG 53329 ||||| || |||||||| || ||||| |||||||| ||||| ||||||||||| Sbjct 4148 TACTTCACCCACGCCACCCCCACCCTCTTCAACGCCGGTACCCCCAACCCTCAGATGAGT 4089 Query 53330 AGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTCAAG 53389 |||||| |||| || |||||||| ||| ||||| ||||||||||| ||||| ||| Sbjct 4088 TCTTGCTTCTTGGTTGCCATGAAGGACGACAGTATCGAGGGCATCTACGATACGCTGAAG 4029 Query 53390 GAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCG 53448 || || ||| |||| ||||| | ||||| |||||| ||||| ||| | ||| | || Sbjct 4028 GAATGCGCCATCATCAGCAAGTCTGCCGGTGGCATCGGTTTCCACGTGCAC-AACATTCG 3970 Query 53449 TGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG-ATGGAATCGTGCCTATGC 53507 | | ||| | || ||| || ||||| | || || | || | ||||| |||| Sbjct 3969 TTCCGCCGGAAGTTACATTGCGGGTACCAACGG-GACGTCGAACGGTTTAGTGCCGATGC 3911 Query 53508 TCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGT 53567 | ||||| | || || || ||||| |||||| ||||||| || || ||| | ||||| Sbjct 3910 TTCGCGTGTGGAATAATACCGCCCGTTACGTCGACCAGGGCGGCGGTAAGAGAAAGGGTG 3851 Query 53568 CGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGT---TTCTCGAGCTGC 53624 | || ||| ||||||||||||| ||||||||||||||| | |||| ||||| | || Sbjct 3850 CCTTTGCCGTCTACCTCGAGCCCTGGCACGCCGACATTTTTGAGTTCCTTCTCCTGAAGC 3791 Query 53625 GTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGATT 53683 || || ||| | || || | || |||||| || || ||| || || ||||| Sbjct 3790 GT---AACACCGGTAAGGAGGACAACCGTGCCCGTGATCTCTTCTAC-GCCCTCTGGATC 3735 Query 53684 CCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGG---AGTGGTACCTGATGTGCCCG 53740 || || ||||||||| ||| | ||| ||||| ||||| |||||| ||| Sbjct 3734 CCCGATCTCTTCATG---AAGCGTGTCAAGAGCGAGGGCAAGTGGACGCTGATGGACCCC 3678 Query 53741 AACGAGTGCCCCGGCCTCCAGGGTGT-CTACGGTGAGGAGTTTAACGAGATGTA 53793 | ||| ||||||| || | | | |||| ||||||||| | ||| ||| Sbjct 3677 CATATCTGCACCGGCCT-GAGCGACTGCCACGGCGAGGAGTTTGAGAAGAAGTA 3625 Score = 109 bits (120), Expect = 6e-19 Identities = 302/457 (66%), Gaps = 17/457 (4%) Strand=Plus/Minus Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543 || ||||| ||| | |||||||| ||||| ||||| || || ||| || | || ||| Sbjct 2951 CGAAACTCTCTGTTGGTGGCGCCGATGCCCACCGCCTCCACCAGTCAAATTCTCGGTAAC 2892 Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603 || ||| |||||||| | ||| |||||||| ||| | ||||| || || || ||| Sbjct 2891 AATGAGTGCTTCGAGCCCTTCACCACCAACATTTACGTCCGCCGTACGCTGAGTGGGGAG 2832 Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCT----GCAGAAGATCAACAAGTGGAA 55659 || | | ||||| |||| ||||||||||| || | || |||||| Sbjct 2831 TTCCCGGTTGTGAACAAATACCTTGTCAAGGACCTCATCGCCCGTGGTCT----GTGGAA 2776 Query 55660 CCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAG--AATCTGGAGATT 55717 | || | | || || | | || ||||||| | |||| | | Sbjct 2775 TGAGAAGCTGCGTAACGAAATCATCACCTTCAACGGCTCCGTCCTGCGAATCGACGGTAT 2716 Query 55718 CCTCTGCG-TCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGAT 55776 || | ||| |||||| | ||||| || || ||||||||||| ||| | ||||| Sbjct 2715 CCCGGATGATCTGAAGGAGCTCTACCGCACCGTTTGGGAGATTCCGCAGCGCAAGCTGAT 2656 Query 55777 TGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCAT 55836 ||||||| || | || | ||| || |||||||| ||||| |||| ||||| | Sbjct 2655 TGACATGTCCGCCGCCCGCGCCAAGTATATTGACCAGTCTCAGTCCATGAATCTCTTCCT 2596 Query 55837 GGAGAATCCTTCA---CTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893 |||| ||| || | |||| || | | ||| |||||||| || | ||| || || Sbjct 2595 GGAG--TCCCCCAGCTCCGGCC-AGATCACCTCCATGCACTTCCACTGCTGGCAGTCCGG 2539 Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACCCGCGCC 55930 |||||||| || |||||||| || || ||||||||| Sbjct 2538 CCTCAAGACCGGCATGTACTACCTCCGCACCCGCGCC 2502 >seq1511 Length=4254 Score = 87.8 bits (96), Expect = 2e-12 Identities = 229/346 (66%), Gaps = 10/346 (3%) Strand=Plus/Minus Query 124494 AACTCACGGATGCTGTGCGTCTCACCCGTGCCAATCACGAAATCTTCGGGAATCGACTGC 124553 ||||| || ||||||| ||| || ||| | | || || |||||||| | || Sbjct 3397 AACTCCTTGACGCTGTGCTGCTCCCCGGTGGCGAGGACAAAGTCTTCGGGCTTGTCGTGT 3338 Query 124554 TGCAACATAAGCCACATGGCTTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCA 124613 |||| || ||||||||| | | || ||||||| || || |||||||| || || Sbjct 3337 TGCATGATGAGCCACATGCCATACACATAGTCCTTCGCATGGCCCCAGTCTCGGAGCGCG 3278 Query 124614 TCCAGGTTTCCGAGCTCGATTGGCTTGGCCGTCTTGTTCCACTCC--GCCAAACCCAGTG 124671 | | ||| ||||| || | |||| | |||||| || || | | | | Sbjct 3277 TTGACGTTACCGAGGAGGAGTTGCTT---CTGCTTGTTGTGCTTGATGCGGACGGCGGCG 3221 Query 124672 T----AATCTTGCGCGTCACAAACTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGA 124727 |||||| ||||| ||| | ||| || || |||||||| || || ||| Sbjct 3220 CGGACAATCTTTTTGGTCACGAACGTCGCACCACGGCGGGGGGACTCGTGATTAAAGAGA 3161 Query 124728 ATGCCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCCA 124787 || || | | ||||||||| |||||||||||||||||| || ||||| | | Sbjct 3160 ATACCGTTGCTCGCAAACATATTGTACGACTCGCGGTAGTTCTTGACAATCCAGAAGGCG 3101 Query 124788 AAGAGCTTGGACACGCCATAGGGGCT-TCGGGGGTAGAATGGGGTG 124832 ||||||||| ||| | ||||| || ||||||||||| |||||| Sbjct 3100 TAGAGCTTGGCGACGGCGTAGGGACTGGCGGGGGTAGAAGGGGGTG 3055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547161599889400