Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq153 203 4e-47 seq5385 185 1e-41 seq4492 179 4e-40 seq753 159 4e-34 seq799 149 7e-31 seq7439 145 9e-30 seq3286 96.9 4e-15 >seq153 Length=16899 Score = 203 bits (224), Expect = 4e-47 Identities = 181/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| |||||||||||||| || | || ||||| ||||| | Sbjct 9418 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGC 9477 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || |||||||||| ||||||||||||||||| || || || |||||| Sbjct 9478 GACACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 9537 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| |||||||| |||||||| | || ||||| || ||||| || Sbjct 9538 CAGCGCCTCATCTTTGCCGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCCGACTACAAC 9597 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| |||||||| ||| | || || |||||||| Sbjct 9598 ATCCAGAAGGAGTCCACCCTTCATCTCGTCCTCCGCCTCCGCGGTGG 9644 Score = 82.4 bits (90), Expect = 9e-11 Identities = 123/175 (70%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||| |||||| || ||||| ||||||||||| | || ||| |||| ||| | | Sbjct 8877 ATGAAAATCTCCGTGTTCACGCTCACCGGCAAGACCTTCACCCTTAAGGTCGAGCCCAGC 8936 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | | ||| | ||||||| || ||| |||| ||||| || ||||| |||| | Sbjct 8937 GACACCCTTGTCGACTTGAAGGGTATGATTGAGGAGAAGGAAGGCATTCCCTCAGAGGAA 8996 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACT 27580 ||| | || || ||||| |||||| ||||||| || || || || || |||| Sbjct 8997 CAGAGCCTTATCTTTGCCGGTAAGGCCCTCGAGGGGGACCGCACTCTCGCTGACT 9051 >seq5385 Length=1056 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || ||||| ||||| || | || ||||| ||||| | Sbjct 672 ATGCAAATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGTCCAGC 731 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || |||||||||| ||||||||||||||||| || || || |||||| Sbjct 732 GACACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 791 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || |||||||| ||||| || | ||| ||||| || ||||| || Sbjct 792 CAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAAGAAGGTCGCACCCTCGCCGACTACAAC 851 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || ||||| ||| | || ||||||||||| Sbjct 852 ATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGCCTTCGCGGTGG 898 Score = 170 bits (188), Expect = 2e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 27421 AAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAAT 27480 ||||| || ||||||||||| || | || ||||| ||||| | || | ||| | || Sbjct 2 AAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGCGACACCATCGAGAAC 61 Query 27481 TTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTT 27540 |||||||||| ||||||||||||||||| || || || ||||||||||| || || || Sbjct 62 GTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTTC 121 Query 27541 GCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCC 27600 || |||||||| ||||| || | || ||||| || ||||| || |||| ||||| ||| Sbjct 122 GCCGGTAAGCAGCTCGAAGAAGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCC 181 Query 27601 ACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || ||||| ||| | || ||||||||||| Sbjct 182 ACCCTCCATCTCGTCCTCCGCCTTCGCGGTGG 213 >seq4492 Length=1347 Score = 179 bits (198), Expect = 4e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| || || ||||| || ||||||||||| || | || ||||| ||||| | Sbjct 357 ATGCAAATTTTCGTGAAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGC 298 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || |||||||||| ||||||||||||||||| || || || |||||| Sbjct 297 GACACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAG 238 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || |||||||| || || || | || ||||| || ||||| || Sbjct 237 CAGCGCCTCATCTTCGCCGGTAAGCAGCTGGAAGAGGGCCGCACCCTCGCCGACTACAAC 178 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| ||||| || ||||| ||| | || ||||||||||| Sbjct 177 ATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGCCTTCGCGGTGG 131 >seq753 Length=7390 Score = 159 bits (176), Expect = 4e-34 Identities = 737/1146 (64%), Gaps = 54/1146 (5%) Strand=Plus/Plus Query 80638 GCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGC-GCGCCTG-TGGGTCGT 80695 || |||| || ||| ||| |||| | ||| ||||| ||||| |||||| | | |||| Sbjct 3118 GCGGCGTAGTAGATGGTCTCGAAGATGTCCTCGTTCA-ACCGCTGCGCCTCCTCGCTCGT 3176 Query 80696 CGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCG 80755 ||| | | || | | || || |||| |||| ||||| ||||||| | ||| || Sbjct 3177 -GAAGGGGAGGCGAAGGAGAATAAAGGCGTCCGCCAACCCCTGCACGCCGAGGCCGACCG 3235 Query 80756 GGCGGTGGCGCTTGTTCGATCGCTCGGCC---TCCGGAATTGGGTAAAAGTTATTATCGA 80812 |||||| ||| |||| || |||| ||| | ||||| |||| || | Sbjct 3236 GGCGGTTTCGCATGTTACTGCGTCTGGCCGTTTCC---ACGGGGTAGTAGTTGCGGTCAA 3292 Query 80813 TGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGA 80872 |||| ||||| || ||| || || || || || || | || ||||| ||| | Sbjct 3293 TGACTCGGTTGAGATTGTAGGTCACGTCCTTGGTGACCTCGTAGAGCTTCTGGTGGTCAA 3352 Query 80873 ATTGG---TTCCCCTT---CACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGG 80926 | | ||| | | ||| || || ||| | ||| |||| |||||||| | Sbjct 3353 AGACGCCCTTCTCGGTGTCCACGAAGCGGGGGAGGGCGATGGAGGCCAAGTTGCACACCG 3412 Query 80927 CCACCTCTTCA--GCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAAT 80984 || ||| || || |||| ||| | || || ||||||| || || |||| || Sbjct 3413 CCGTCTCGTCCTTGCTGGTGTA--CTCCATAATCTCGGTGCACAGGTTGGAGCACTTGAT 3470 Query 80985 TGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGG 81044 || ||||| ||||||||||| ||||| |||||||| ||||||||| |||| | || Sbjct 3471 GGTGCCCAGATTTTTCTGGTTGGACTTTCGGTTGCAAGAGTCCTTGTACAGCATGAAAGG 3530 Query 81045 GGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCAC 81104 | ||||||||| ||||| |||| || |||||| ||| | ||| |||| | | | Sbjct 3531 GACACCGGTCTCCACCTGGGACTCCAGAATGGCGAACCACAGCTCTTGCGC---GGCGAT 3587 Query 81105 CTTGCGGAATTTG------CCTTCGGCCACATACTTGGCGTA-AGCTTCGTCGAACTTGG 81157 |||||| || || | | | |||| |||| |||| || |||| Sbjct 3588 GGTGCGGA---TGCCCAGACCCTGTCTCTCGTACTCCTCGTACTTCTTC-TCAAACTCCT 3643 Query 81158 CACCGTGAAGTTCAGTGAGGTCTGGGCACTCGTTAGGGCACATCAGGTGCCAGTCGGTGT 81217 | ||||| || | ||| | | ||| | ||| |||||| ||| | | | Sbjct 3644 CGCCGTGGCAGTCGCTCAGGCCGGTGCAGATATGGGGGTCCATCAGCGTCCACTTGCCCT 3703 Query 81218 CGTTCTCTACAGCCTTCATGAAAGCGTCAGGGATCCAGAGGGCGGTGAACAGGTCGCGGC 81277 || ||| ||| ||||||||| || ||||||||||||||| ||| || || ||| Sbjct 3704 CGCTCTTGACACGCTTCATGAAGAGATCGGGGATCCAGAGGGCGTAGAAGAGATCACGGG 3763 Query 81278 AGCGCGCCTCCTCATCACCCTGGTTGAGGCGCAACTCGAGA---AAGTCCATGATGTCCG 81334 || ||||| | ||| | || ||| | |||| || || | ||||| | Sbjct 3764 CACGGTTGTCCTCCTTACC---GGTGTTACGCTTCAGGAGAAGGAACTCAAAAATGTCGG 3820 Query 81335 CATGCCATGGCTCCAGATACACGGCGATCGACCCCTTGC---GACGGCCACCCTGGTTGA 81391 | ||||| ||||| || || ||||| | | ||||| | || ||| ||||||| || Sbjct 3821 CGTGCCAGGGCTCGAGGTAGACGGCAAAGGCACCCTTTCTCTTACCGCCGCCCTGGTCGA 3880 Query 81392 CGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCTGACTGACCGT 81451 |||||||||| || || | || || | ||| || | | ||| | ||| |||| Sbjct 3881 CGTAACGGGCGGTATTATTCCACACGCGAAGCATCGGCACTAAACCGTTCGACGTCCCGT 3940 Query 81452 TCGTACCCACGATACGCGAC--CCCTTGGCGCGCACCTTGCTGA-TTGAAAGACCGATGC 81508 | |||||| | || | || || || || | ||| | || || |||||||| Sbjct 3941 TGGTACCCGCAAT--GTAACTTCCGGCGGAACGAATGTTGTGCACGTGGAA-ACCGATGC 3997 Query 81509 CACCTGACCACTT--TGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCCCTCGAT 81566 |||| | |||| ||| | ||| || |||| || || || || |||||||| Sbjct 3998 CACCGGCAGACTTGCTGATGATGGCGCATTCC--TTCAGCGTATCGTAGATGCCCTCGAT 4055 Query 81567 GCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGC 81626 || || | |||||| ||| |||||| || |||||||||| | | ||||| Sbjct 4056 ACTGTCGTCCTTCATGGCAACCAAGAAGCAAGAACTCATCTGAGGGTTGGGGGTACCGGC 4115 Query 81627 ATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATAGGTTTC 81686 ||||| || || ||||| ||||| |||| || | | || | ||||||||||| Sbjct 4116 GTTGAAGAGGGTGGGGGTGGCGTGGGTGAAGTAGCCCTGGGAGAGGAGGTCATAGGTGCG 4175 Query 81687 CTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAAACATGTACTG 81746 |||||| | ||||| |||||||| || || || || || | || ||||| ||| Sbjct 4176 GCGGACGCGGTCCAAATCGTGGCCGTGAATGCCAATGGCCACTCGGAGAAGCATGTGCTG 4235 Query 81747 -GGGCG 81751 ||||| Sbjct 4236 CGGGCG 4241 >seq799 Length=7053 Score = 149 bits (164), Expect = 7e-31 Identities = 125/152 (82%), Gaps = 1/152 (1%) Strand=Plus/Plus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 |||||||| ||||||||||||||||| ||||| || |||||||||||||| || || ||| Sbjct 1 AAGGCTAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCT 60 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 |||||||| |||||||| | || ||||| || ||||| || |||| ||||| |||||| Sbjct 61 GGTAAGCAGCTCGAGGAGGGCCG-ACCCTCGCGGACTACAACATCCAGAAGGAGTCCACT 119 Query 27604 CTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 ||||| | || | || ||||| |||||||| Sbjct 120 CTTCACTTGGTGCTCCGCCTTCGTGGTGGACA 151 >seq7439 Length=588 Score = 145 bits (160), Expect = 9e-30 Identities = 143/185 (77%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 27448 CTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAG 27507 || ||||| ||||| | || | ||| | || |||||||||| || |||||||||||| Sbjct 9 CTCGAGGTCGAGTCCAGCGACACCATCGAGAACGTGAAGGCTAAGATCCAGGACAAGGAG 68 Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 || || || || ||||||||||| || || || || |||||||| ||||| || | ||| Sbjct 69 GGCATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAAGAAGGTCGC 128 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 ||||| || ||||| || |||| ||||| ||||| || ||||| ||| | || || ||| Sbjct 129 ACCCTCGCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGTCCTCCGCCTCCGC 188 Query 27628 GGTGG 27632 ||||| Sbjct 189 GGTGG 193 >seq3286 Length=1922 Score = 96.9 bits (106), Expect = 4e-15 Identities = 283/427 (66%), Gaps = 17/427 (4%) Strand=Plus/Plus Query 64738 GTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGC 64797 ||||| || || ||||| || || || ||||| | || |||||||| || ||||| ||| Sbjct 1112 GTGGAGGGCATCTTCTTCTCCGGCTCCTTCTGCGCGATCTTCTGGCTGAAGAAGCGCGGC 1171 Query 64798 CTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAA 64857 ||||||| || ||| | || ||||||||||| || || |||||||| || ||| Sbjct 1172 GTGATGCCCGGCCTGACCTTCAGCAACGAGCTGATTTCCCGTGACGAGGGTCTGCACACG 1231 Query 64858 GAATTTGCGGTTACC--CTGT---TCAGCCACCTCAAGGACAAACCATCACATGGGACTA 64912 || |||||| | || |||| ||||||| ||||| |||| | || | | | Sbjct 1232 GACTTTGCG--TGCCTGCTGTACAACAGCCACATCAAGAACAAGCTGTCGCGCGAGCGCG 1289 Query 64913 TAATTGATATAGTAAAATCGGCTGTAGAAATTGAAAAGGAATTCATTACTGC-CGCGCTT 64971 | | | || | | || || || || || ||||| ||||| |||| | | | Sbjct 1290 TGCTGAACATCATCACCGATGCCGTGGACATCGAGAAGGAGTTCAT--CTGCGAGTCCCT 1347 Query 64972 CCGTGT-CGTCTCATCGGCATGGATGCCGATAAGATGAAACAGTATATCGAATTTGTAGC 65030 || || || || || || ||| | | || | ||||| ||||| || || || || || Sbjct 1348 CCCCGTGCGCCTGATTGGTATGAACTCGGAGATGATGAGCCAGTACATTGAGTTCGTGGC 1407 Query 65031 AGATCGCCTGCT-TACTCAGTTTGGTA--TTAAGCCCTACTGGAATTCTTCAAATCCATT 65087 || || ||||| ||| || | | |||| |||| || | | || || || Sbjct 1408 GGACCGTCTGCTGGTCTCCCTTGGCGAGGCGAAGCACTAC---AACGCGACGAACCCCTT 1464 Query 65088 TGACTGGATGGAGACGATCAGCCTGGAGGGGAAGACTAACTTTTTTGAAAAGAGGGTAGG 65147 |||| ||||||| |||| ||| || ||||| ||||| || || |||| ||| || Sbjct 1465 CGACTTCATGGAGATGATCTCCCTCCCTGGCAAGACCAACTTCTTCGAGAAGAAGGTTGG 1524 Query 65148 TGATTAC 65154 ||| ||| Sbjct 1525 TGACTAC 1531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570253704017360