Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq5385 84.2 1e-11 >seq5385 Length=1056 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | || | |||||| ||| |||||| || ||||| || || | Sbjct 898 CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCG 839 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || |||||||| || || | ||||| |||||||| || Sbjct 838 AGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGG 779 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||| ||| || | || ||| | || ||||| | ||| || Sbjct 778 ATGCCCTCCTTGTC-CTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGAC 720 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || |||||||| | || ||||| ||||| ||||| Sbjct 719 CTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314699094145049