Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq4492 165 2e-35 seq5385 159 8e-34 seq153 149 1e-30 seq7439 138 3e-27 seq799 114 3e-20 >seq4492 Length=1347 Score = 165 bits (182), Expect = 2e-35 Identities = 171/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| || || || |||||||| || |||||||| || || || ||||| Sbjct 137 CGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTG 196 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || |||||||||||||| || |||||||| ||||| || ||||| || || | || Sbjct 197 CGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCC 256 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| |||||||| ||||||||||| | || |||||||| Sbjct 257 TCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGG 316 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 | ||| ||||| || ||||| ||||| || || | ||||| || Sbjct 317 GCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCATATT 360 >seq5385 Length=1056 Score = 159 bits (176), Expect = 8e-34 Identities = 168/221 (76%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| || || || |||||||| || |||||||| || || || ||||| Sbjct 892 CGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTG 833 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||| |||||||| || |||||||| ||||| || ||||| || || | || Sbjct 832 CGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCC 773 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| |||||||| ||||||||||| | || |||||||| Sbjct 772 TCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGG 713 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||| ||||| || ||||| ||||| || || | ||||| Sbjct 712 GCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | ||||| || || || |||||||| || |||||||| || || || ||||| Sbjct 207 CGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTG 148 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | || ||||| |||||||| || |||||||| ||||| || ||||| || || | || Sbjct 147 CGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCC 88 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 ||||||||||| ||||| |||||||| ||||||||||| | || |||||||| Sbjct 87 TCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGG 28 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTT 211099 | ||| ||||| || ||||| ||||| Sbjct 27 GCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq153 Length=16899 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || ||||| |||||||| || |||||||| || || || ||||| | || || Sbjct 9629 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCC 9570 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || || ||||| ||||| || ||||| || || | || ||||||||| Sbjct 9569 TCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 9510 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| |||||||| ||||||||||| | || |||||||| | ||| ||| Sbjct 9509 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 9450 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | ||||| Sbjct 9449 TTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq7439 Length=588 Score = 138 bits (152), Expect = 3e-27 Identities = 136/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| || || || |||||||| || |||||||| || || || ||||| | || ||| Sbjct 178 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCT 119 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| ||||| || ||||| || || | || ||||||||| Sbjct 118 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 59 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||| |||||||| ||||||||||| | || |||||||| | ||| Sbjct 58 TGGATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGAT 3 >seq799 Length=7053 Score = 114 bits (126), Expect = 3e-20 Identities = 109/138 (79%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || || | ||||||||||||||| || |||||||| || ||||| ||||| Sbjct 143 ACGAAGGCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGT 84 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || |||||||| || |||||||| || || || ||||| || |||| || Sbjct 83 CGGCCC-TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCC 25 Query 211013 TTCCTTGTCCTGGATCTT 211030 ||||||||||| ||||| Sbjct 24 CTCCTTGTCCTGAATCTT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159033884946845