Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq4492 125 2e-23 seq5385 120 7e-22 seq7439 113 1e-19 seq153 107 5e-18 seq799 93.3 1e-13 >seq4492 Length=1347 Score = 125 bits (138), Expect = 2e-23 Identities = 162/224 (72%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || ||||| ||||| || || |||| ||||| ||||| | || Sbjct 137 CGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTG 196 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| |||||||| || |||||||| || || || ||||| || || || || Sbjct 197 CGGCCCTCTTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCC 256 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| |||||| ||||||||||| || || || || | Sbjct 257 TCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGG 316 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 | ||| |||||||| || | || || | ||| | |||||| || Sbjct 317 GCGATGGTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCATATT 360 >seq5385 Length=1056 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || ||||| ||||| || || |||| ||||| ||||| | || Sbjct 892 CGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTG 833 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| |||||||| || |||||||| || || || ||||| || || || || Sbjct 832 CGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCC 773 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| |||||| ||||||||||| || || || || | Sbjct 772 TCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGG 713 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 | ||| ||||| || || | || || | ||| | |||||| Sbjct 712 GCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || ||||| ||||| || || |||| ||||| ||||| | || Sbjct 207 CGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTG 148 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || ||||| |||||||| || |||||||| || || || ||||| || || || || Sbjct 147 CGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCC 88 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| |||||| ||||||||||| || || || || | Sbjct 87 TCCTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGG 28 Query 225673 GTGATCGTCTTGCCCGT 225689 | ||| |||||||| || Sbjct 27 GCGATGGTCTTGCCGGT 11 >seq7439 Length=588 Score = 113 bits (124), Expect = 1e-19 Identities = 116/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || ||||| ||||| || || |||| ||||| ||||| | || | || ||| Sbjct 178 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCT 119 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || ||||| || || || || |||||||| Sbjct 118 TCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 59 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| |||||| ||||||||||| Sbjct 58 TGGATCTTAGCCTTCACGTTCTCGATGGTGTC 27 >seq153 Length=16899 Score = 107 bits (118), Expect = 5e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || ||||| || || |||| ||||| ||||| | || | || || Sbjct 9629 AGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCC 9570 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||| || || || || |||||||| Sbjct 9569 TCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 9510 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||||||||| || || || || | | ||| ||| Sbjct 9509 TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTC 9450 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | |||||| Sbjct 9449 TTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq799 Length=7053 Score = 93.3 bits (102), Expect = 1e-13 Identities = 104/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| |||||||| || || |||| ||||| || || | || Sbjct 143 ACGAAGGCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGT 84 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 ||| || || |||||||| ||||||||||| || || || ||||| || ||||| || Sbjct 83 CGGCCC-TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCC 25 Query 225612 TTCCTTGTCTTGGATCTT 225629 |||||||| || ||||| Sbjct 24 CTCCTTGTCCTGAATCTT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192409683679382