Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq4492 120 7e-22 seq153 114 3e-20 seq5385 113 1e-19 seq7439 91.5 3e-13 >seq4492 Length=1347 Score = 120 bits (132), Expect = 7e-22 Identities = 173/242 (71%), Gaps = 4/242 (2%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || ||||| || ||||||||||| ||||| | || | || || Sbjct 145 GAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTC 204 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 205 TTCCAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 264 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || || || |||| | | ||| ||| | ||| || || || | || Sbjct 265 CTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGA--CTCGACCTCGAGGGCGATG 322 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACCCTTACTCTACCCATCTTTA 152129 || ||||| ||||| ||||||||||| | ||||| || || || ||| | ||| || Sbjct 323 GTCTTGCCGGTGAGGGTCTTCACGAAAATTTGCATATTTCCTTTTTTCTTTCTATCATTT 382 Query 152130 AC 152131 || Sbjct 383 AC 384 >seq153 Length=16899 Score = 114 bits (126), Expect = 3e-20 Identities = 159/221 (72%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| |||||||| || ||||| || ||||||||||| ||||| | || | Sbjct 9636 GAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 9577 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||| ||||| || | ||||||||||| | ||| || || Sbjct 9576 GCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTC 9517 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGA 152063 ||| || ||||| || || || |||| | | |||| || |||| || || || Sbjct 9516 CTTGTCCTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCG--ACCTCGAGG 9459 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || || ||||||||||||| ||||| Sbjct 9458 GCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCAT 9418 >seq5385 Length=1056 Score = 113 bits (124), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || ||||| || ||||||||||| ||||| | || | || || Sbjct 884 GAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTC 825 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 824 TTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 765 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || || || |||| | | |||| || |||| || || || | || Sbjct 764 CTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGACTCG--ACCTCGAGGGCGATG 707 Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || ||||| ||||||||||| | ||||| Sbjct 706 GTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 105 bits (116), Expect = 2e-17 Identities = 145/201 (72%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| ||||| || || ||||| || ||||||||||| ||||| | || | || || Sbjct 199 GAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTC 140 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || || ||||||||||| || | ||||||||||| | ||| || ||||| || Sbjct 139 TTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC 80 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGT--CTGAACTCTCTACTTCAAGAGTAATA 152069 ||||| || || || |||| | | ||| ||| | ||| || || || | || Sbjct 79 CTGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGGA--CTCGACCTCGAGGGCGATG 22 Query 152070 GTTTTGCCCGTGAGAGTCTTC 152090 || ||||| ||||| |||||| Sbjct 21 GTCTTGCCGGTGAGGGTCTTC 1 >seq7439 Length=588 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | |||||| ||||| || || ||||| || ||||||||||| ||||| | || | Sbjct 185 GAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCG 126 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || ||||| || || ||||||||||| || | ||||||||||| | ||| || || Sbjct 125 ACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTC 66 Query 152006 CTTTTCTTGAATTTT 152020 ||| || || || || Sbjct 65 CTTGTCCTGGATCTT 51 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153703228184463