Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq153 143 2e-29 seq4492 138 8e-28 seq5385 132 3e-26 seq7439 93.3 3e-14 seq799 87.8 1e-12 >seq153 Length=16899 Score = 143 bits (158), Expect = 2e-29 Identities = 160/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| ||| |||||| ||||||||||| |||||||| ||| | || || Sbjct 9626 ACGAGATGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCCTCG 9567 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||||||| || | || | || ||||| ||| Sbjct 9566 AGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 9507 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| |||| | ||||||||| ||| || ||||| | | || ||||| Sbjct 9506 ATCTTAGCCTTCAC-GTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTT 9448 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||||||||||||||||||||||| Sbjct 9447 GCCGGTAAGGGTCTTCACGAAGATTTGCATG 9417 >seq4492 Length=1347 Score = 138 bits (152), Expect = 8e-28 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| |||||||| ||| | || ||| Sbjct 149 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCCTCTTCC 208 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 209 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 268 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | |||| | ||||||||| ||| || ||||| | | || ||||| Sbjct 269 ATCTTAGCCTTC-ACGTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTT 327 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||||||||| |||||||| Sbjct 328 GCCGGTGAGGGTCTTCACGAAAATTTGCAT 357 >seq5385 Length=1056 Score = 132 bits (146), Expect = 3e-26 Identities = 157/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| |||||||| ||| | || || Sbjct 880 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCG 821 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 820 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 761 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| |||| | ||||||||| ||| || ||||| | | || ||||| Sbjct 760 ATCTTAGCCTTCAC-GTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTT 702 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || ||||||||||||||||| |||||||| Sbjct 701 ACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 113 bits (124), Expect = 3e-20 Identities = 144/196 (73%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| |||||||| ||| | || || Sbjct 195 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGGCCTTCTTCG 136 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 135 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGA 76 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||||| |||| | ||||||||| ||| || ||||| | | || ||||| Sbjct 75 ATCTTAGCCTTCAC-GTTCTCGATGGTGTCGCTGGACTCGACCTCGAGGGCGATGGTCTT 17 Query 44308 TCCCGTGAGGGTCTTC 44323 || |||||||||||| Sbjct 16 GCCGGTGAGGGTCTTC 1 >seq7439 Length=588 Score = 93.3 bits (102), Expect = 3e-14 Identities = 121/165 (73%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| |||||||| ||| | || || Sbjct 175 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGACCTTCTTCG 116 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | || | || ||||| ||| Sbjct 115 AGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 56 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTC 44292 ||||| |||| | |||| | ||||||||| ||| || ||||| Sbjct 55 ATCTTAGCCTTC-ACGTTCTCGATGGTGTCGCTGGACTCGACCTC 12 >seq799 Length=7053 Score = 87.8 bits (96), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 5/128 (4%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGA--GTTGGCGCTCGTCG 44185 ||||| |||||| ||| |||||| ||||||||||| || |||| || ||| ||| ||| Sbjct 131 CACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGGGTCGGCCCTCCTCG 72 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 |||||||| || || ||||||| ||||||||| || | || | || ||||| ||| Sbjct 71 ---AGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 15 Query 44246 GTTATCTT 44253 ||||| Sbjct 14 TGAATCTT 7 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359955507143001