Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5385 174 4e-38 seq4492 168 2e-36 seq153 156 1e-32 seq7439 136 1e-26 seq799 86.0 2e-11 >seq5385 Length=1056 Score = 174 bits (192), Expect = 4e-38 Identities = 162/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 675 CAAATTTTCGTGAAGACCCTCACCGGTAAGACCATCGCCCTCGAGGTCGAGTCCAGCGAC 734 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || |||||||||||||| || || ||||| ||||||||||| Sbjct 735 ACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 794 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||||||||| || | || || ||||| || ||| || Sbjct 795 CGCCTCATCTTCGCCGGTAAGCAGCTCGAAGAAGGTCGCACCCTCGCCGACTACAACATC 854 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 855 CAGAAGGAGTCCACCCTCCATCTCGT 880 Score = 154 bits (170), Expect = 4e-32 Identities = 151/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 177935 GAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAA 177994 ||| || ||||| || || || ||| |||||||||| || | |||||||||||||| Sbjct 1 GAAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGCGACACCATCGAGAA 60 Query 177995 CGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTT 178054 ||| || |||||||||||||| || || ||||| ||||||||||| || || ||||| Sbjct 61 CGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTT 120 Query 178055 CGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATC 178114 |||||| || ||||||||||| || | || || ||||| || ||| |||| || || || Sbjct 121 CGCCGGTAAGCAGCTCGAAGAAGGCCGCACCCTCGCCGACTACAACATCCAGAAGGAGTC 180 Query 178115 AACACTGCATCTTGT 178129 || || ||||| || Sbjct 181 CACCCTCCATCTCGT 195 >seq4492 Length=1347 Score = 168 bits (186), Expect = 2e-36 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||||||||| || ||||| || || || ||| |||||||||| || | ||| Sbjct 354 CAAATTTTCGTGAAGACCCTCACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGCGAC 295 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || |||||||||||||| || || ||||| ||||||||||| Sbjct 294 ACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 235 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| ||||| || | || || ||||| || ||| || Sbjct 234 CGCCTCATCTTCGCCGGTAAGCAGCTGGAAGAGGGCCGCACCCTCGCCGACTACAACATC 175 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 174 CAGAAGGAGTCCACCCTCCATCTCGT 149 >seq153 Length=16899 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| || || || || || || ||| |||||||||| || | ||| Sbjct 9421 CAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCGCCCTCGAGGTCGAGTCCAGCGAC 9480 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||||||||| || |||||||||||||| || || ||||| ||||||||||| Sbjct 9481 ACCATCGAGAACGTGAAGGCTAAGATTCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 9540 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| ||||| || |||||||| || || | || || ||||| || ||| || Sbjct 9541 CGCCTCATCTTTGCCGGTAAGCAGCTCGAGGAGGGCCGCACCCTCGCCGACTACAACATC 9600 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 9601 CAGAAGGAGTCCACCCTTCATCTCGT 9626 >seq7439 Length=588 Score = 136 bits (150), Expect = 1e-26 Identities = 134/173 (77%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 177957 ATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGAC 178016 ||| |||||||||| || | ||||||||||||||||| || ||||| |||||| Sbjct 3 ATCGCCCTCGAGGTCGAGTCCAGCGACACCATCGAGAACGTGAAGGCTAAGATCCAGGAC 62 Query 178017 AAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGAT 178076 || || || ||||| ||||||||||| || || ||||||||||| || ||||||||||| Sbjct 63 AAGGAGGGCATCCCCCCGGACCAGCAGCGCCTCATCTTCGCCGGTAAGCAGCTCGAAGAA 122 Query 178077 GGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || | || || ||||| || ||| |||| || || || || || ||||| || Sbjct 123 GGTCGCACCCTCGCCGACTACAACATCCAGAAGGAGTCCACCCTCCATCTCGT 175 >seq799 Length=7053 Score = 86.0 bits (94), Expect = 2e-11 Identities = 95/124 (77%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 |||||||||||||| || || || || ||||||||||| || || |||||||| || || Sbjct 7 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGTCTGATCTTCGCTGGTAAG 66 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || ||| || || || || ||| |||| || || || || || || Sbjct 67 CAGCTCGAGGA-GGGCCGACCCTCGCGGACTACAACATCCAGAAGGAGTCCACTCTTCA- 124 Query 178125 CTTG 178128 |||| Sbjct 125 CTTG 128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203608542423882