Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Angomonas_20desouzai_20[genbank_20GCA_5F000482185.1_202013-10-25] 7,953 sequences; 24,250,851 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq5385 163 3e-35 seq153 152 5e-32 seq7439 136 4e-27 seq799 109 5e-19 >seq5385 Length=1056 Score = 163 bits (180), Expect = 3e-35 Identities = 180/236 (76%), Gaps = 3/236 (1%) Strand=Plus/Minus Query 41628 CATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTAT 41687 |||||| || ||||| || || | || ||||| || ||| ||||||||| ||||| | Sbjct 905 CATCACA-CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGT 847 Query 41688 AGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGT 41747 |||||| ||||||||| | || ||||||||||| |||||||| || |||||||| |||| Sbjct 846 AGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGT 787 Query 41748 CCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTC 41806 ||| ||| | || |||||||||| ||| | || | ||||| | | |||||||| Sbjct 786 CCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTG 728 Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||||| | | || || ||||| || || ||||| |||||||| ||||| Sbjct 727 GACTCGACCTCGAGGGCGATGGTCTTACCGGTGAGGGTCTTCACGAAAATTTGCAT 672 Score = 140 bits (154), Expect = 3e-28 Identities = 166/221 (75%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 41628 CATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTAT 41687 |||||| || ||||| || || | || ||||| || ||| ||||||||| ||||| | Sbjct 220 CATCACA-CCACCGCGAAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGT 162 Query 41688 AGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGT 41747 |||||| ||||||||| | || ||||||||||| |||||||| || |||||||| |||| Sbjct 161 AGTCGGCGAGGGTGCGGCCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGT 102 Query 41748 CCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTC 41806 ||| ||| | || |||||||||| ||| | || | ||||| | | |||||||| Sbjct 101 CCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTG 43 Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTT 41847 ||||| ||||| | | || || || || || || ||||| Sbjct 42 GACTCGACCTCGAGGGCGATGGTCTTGCCGGTGAGGGTCTT 2 >seq153 Length=16899 Score = 152 bits (168), Expect = 5e-32 Identities = 180/240 (75%), Gaps = 3/240 (1%) Strand=Plus/Minus Query 41628 CATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTAT 41687 |||||| || ||||| || || | || ||||| || ||| ||||||||| ||||| | Sbjct 9651 CATCACA-CCACCGCGGAGGCGGAGGACGAGATGAAGGGTGGACTCCTTCTGGATGTTGT 9593 Query 41688 AGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGT 41747 |||||| ||||||||| | || ||||||||||| ||||| || || |||||||| |||| Sbjct 9592 AGTCGGCGAGGGTGCGGCCCTCCTCGAGCTGCTTACCGGCAAAGATGAGGCGCTGCTGGT 9533 Query 41748 CCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGACACAGTGTCGCTC 41806 ||| ||| | || |||||||||| ||| | || | ||||| | | |||||||| Sbjct 9532 CCGGGGGGATGCCCTCCTTGTCC-TGAATCTTAGCCTTCACGTTCTCGATGGTGTCGCTG 9474 Query 41807 GACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTTA 41866 ||||| ||||| | | || || || || || || ||||| ||||| || |||||| || Sbjct 9473 GACTCGACCTCGAGGGCGATGGTCTTGCCGGTAAGGGTCTTCACGAAGATTTGCATGGTA 9414 >seq7439 Length=588 Score = 136 bits (150), Expect = 4e-27 Identities = 145/190 (76%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 41628 CATCACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTAT 41687 |||||| || ||||| || || | || ||||| || ||| ||||||||| ||||| | Sbjct 200 CATCACA-CCACCGCGGAGGCGGAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGT 142 Query 41688 AGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGT 41747 |||||| ||||||||| | || ||||||||||| |||||||| || |||||||| |||| Sbjct 141 AGTCGGCGAGGGTGCGACCTTCTTCGAGCTGCTTACCGGCGAAGATGAGGCGCTGCTGGT 82 Query 41748 CCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGTGTCGCTCG 41807 ||| ||| | || |||||||||| ||| || ||||| | | |||||||| | Sbjct 81 CCGGGGGGATGCCCTCCTTGTCCTGGATCTTAGCCTTCACGTTCTCGATGGTGTCGCTGG 22 Query 41808 ACTCCACCTC 41817 |||| ||||| Sbjct 21 ACTCGACCTC 12 >seq799 Length=7053 Score = 109 bits (120), Expect = 5e-19 Identities = 106/135 (79%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||||| || || ||| ||||||||| ||||| ||||| | | Sbjct 148 CCACCACGAAGGCGGAGCACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGCG 89 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || ||||||||||| || ||||| ||||| ||||| ||||||| |||| Sbjct 88 AGGGTCGGCCC-TCCTCGAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGGGGA 30 Query 41756 ACGCTCTCCTTGTCC 41770 | || |||||||||| Sbjct 29 ATGCCCTCCTTGTCC 15 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462258041203600