Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1815 116 7e-21 >seq1815 Length=86323 Score = 116 bits (128), Expect = 7e-21 Identities = 371/569 (65%), Gaps = 6/569 (1%) Strand=Plus/Plus Query 35147 AAGGACGATAGAACTGGAACAGGAACTCTATCCATTTTTGGACCCCAAATGAGGTTCTCT 35206 || || ||| | |||||| ||||| | || || |||||| | |||||| | |||||| Sbjct 2062 AAAGAAGATCGCACTGGAGTTGGAACAATTTCAATCTTTGGAGCTCAAATGCGATTCTCT 2121 Query 35207 CTTCGAGACGACACTATTCCAGTTCTCACTACCAAGAAAATTTTCTGGAGAGGAGTTGTG 35266 | || | | | || || ||||||| || || | || ||| |||| ||| Sbjct 2122 TTGCGCAATGGCCAGATGCCCCTTCTCACAACGAAACGTGTGTTTTGGCGAGGTGTTTGC 2181 Query 35267 GAAGAACTCTCGTGGTTCATCAGGGGCAATACAGACGCCAAAGAATTG-GCCAAGAAGAA 35325 |||||||||| ||||||| | | || | ||||| || ||| | | ||| | Sbjct 2182 GAAGAACTCTTGTGGTTCCTTCGCGGAGAAACAGATGCACGGCTGTTGAGTGACAAAGGA 2241 Query 35326 GATACACATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGA 35385 | | | || ||| ||| |||||||| || | |||| |||| || | || | || Sbjct 2242 GTGA-AGATATGGGACGACAATGGGTCACGAGCATTTCTGGATAGCCGTGGTCTCACAGA 2300 Query 35386 TAGAGCAGAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGA 35445 | | || || ||||||||||| || || || || |||||| | || || || ||||| Sbjct 2301 CAACGAAGTTGGCGATTTGGGACCTGTTTATGGCTTTCAATGGAGGCACTTCGGAGCTGA 2360 Query 35446 ATATGATACCTGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACT 35505 || || || | | | || | ||| |||||| | |||||| | | || | Sbjct 2361 GTACGAAGGGCGTGATGCGAACTACAATGGCAAGGGTGTAGATCAAATCAAGCAGATCGT 2420 Query 35506 AAAGACCCTGAGAGAAAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCC-TA 35564 | || || | |||||||| |||| | | || || | | || |||||||| | Sbjct 2421 TGAAACTCTACGCAAAAATCCAACTGATCGGCGAATCCTTCTCTCAGCTTGGAATCCCTG 2480 Query 35565 TG-GATCTTCACCTTATGGCTCTTCCTCCATGCCACATGACTGCTCAATTTTATGTGGCT 35623 | |||| || ||||| |||||||| || ||||| | || || |||||||| || Sbjct 2481 CGCGATCAACAAA--ATGGCACTTCCTCCGTGTCACATCATGGCCCAGTTTTATGTTTCT 2538 Query 35624 AATGGAGAATTGTCGTGCCAGTTGTATCAGCGAAGCGGAGATGTCGGGTTGGGCGTGCCC 35683 ||| ||| |||| ||| | |||| || | | ||| | || ||||| || || Sbjct 2539 CGTGGTGAACTGTCTTGCATGATGTACCAAAGGTCTTGTGATATGGGTTTGGGTGTTCCA 2598 Query 35684 TTCAATATTGCATCATACTCTCTTCTGAC 35712 ||||| || ||||| ||||||||||| || Sbjct 2599 TTCAACATCGCATCCTACTCTCTTCTCAC 2627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989555396074480