Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1639 96.9 3e-15 >seq1639 Length=27095 Score = 96.9 bits (106), Expect = 3e-15 Identities = 109/145 (75%), Gaps = 1/145 (1%) Strand=Plus/Minus Query 16698 GCCGCATTTACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGT 16757 |||||||| | |||||||| || | || || | ||||||||||||||||| || |||| Sbjct 2970 GCCGCATT-ATCCTCCTCGGAGGCGGAGCACAAGGTGCAGCGTGGACTCCTTCTGGATGT 2912 Query 16758 TGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTT 16817 ||||||| |||| || | | ||||||| || ||||| || | || || ||||| | Sbjct 2911 TGTAGTCAGCCAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCT 2852 Query 16818 GGTCCACAGGCACGCCCTCTTTGTC 16842 ||||| || | |||||| ||||| Sbjct 2851 GGTCCGGGGGGATGCCCTCCTTGTC 2827 Score = 86.0 bits (94), Expect = 5e-12 Identities = 105/142 (74%), Gaps = 1/142 (1%) Strand=Plus/Minus Query 16702 CATTT-ACCCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGT 16760 ||||| | ||||| || || | || || | ||||||||||||||||| || ||||||| Sbjct 151 CATTTCAACCTCCGCGGAGGCGGAGCACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGT 92 Query 16761 AGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGT 16820 |||| |||| || | | ||||||| || ||||| || | || || ||||| |||| Sbjct 91 AGTCAGCCAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGT 32 Query 16821 CCACAGGCACGCCCTCTTTGTC 16842 || || | |||||| ||||| Sbjct 31 CCGGGGGGATGCCCTCCTTGTC 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405076862105440