Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bodo_20saltans_20[genbank_20GCA_5F001460835.1_202015-11-25] 2,256 sequences; 39,864,394 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq204 131 2e-25 >seq204 Length=29198 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 153201 AGTCTTATAGGTCAAGGATACTATGGAACCATTACACCCCCAGTCATACAGCGAAACGTT 153260 || ||||| || ||||| ||||||| | ||| ||| |||||||| ||||| |||||| Sbjct 24453 AGCCTTATCGGACAAGGTTACTATGATGCTATTTTACCACCAGTCATCCAGCGTAACGTT 24512 Query 153261 CTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAGGGA 153320 || || ||||| | |||||||| ||||||| || |||||||||||||| || || || Sbjct 24513 CTCGAAAATCCCAACTGGTACACTCCTTACACGCCGTATCAAGCTGAGATTTCCCAAGGC 24572 Query 153321 AGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTA-CAGGATTACCAAT 153379 || | || | || || ||||||||||| | || || || ||| || || | || || Sbjct 24573 CGACTTGAGTCGTTGTTGAATTACCAAACTATGATTACCGACATTACCAAGA-TGCCGAT 24631 Query 153380 AGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || |||||||| | | ||| | ||||| || ||| ||||| ||| Sbjct 24632 TGCTAACGCATCGTTGCTTGATCAGGCAACAGCTGCAAGCGAAGCTATG 24680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579196466199040